Gene : Cagra.4701s0003 C. grandiflora v1.1
Defline:  (1 of 1) PTHR18829:SF0 - YAE1 DOMAIN-CONTAINING PROTEIN 1 Genomic Order:  3
Name:  ? Cagra.4701s0003 Secondary Identifier:  ? PAC:28917210
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4701s0003 0.5kb upstream 0.5kb upstream 1694 true Scaffold4701: 4628-6321 Capsella grandiflora
Cagra.4701s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold4701: 4628-5127 Capsella grandiflora
Cagra.4701s0003 0.5kb downstream 0.5kb downstream 1694 true Scaffold4701: 5128-6821 Capsella grandiflora
Cagra.4701s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold4701: 6322-6821 Capsella grandiflora
Cagra.4701s0003 1.0kb upstream 1.0kb upstream 2194 true Scaffold4701: 4128-6321 Capsella grandiflora
Cagra.4701s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold4701: 4128-5127 Capsella grandiflora
Cagra.4701s0003 1.0kb downstream 1.0kb downstream 2194 true Scaffold4701: 5128-7321 Capsella grandiflora
Cagra.4701s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold4701: 6322-7321 Capsella grandiflora
Cagra.4701s0003 2.0kb upstream 2.0kb upstream 3194 true Scaffold4701: 3128-6321 Capsella grandiflora
Cagra.4701s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold4701: 3128-5127 Capsella grandiflora
Cagra.4701s0003 2.0kb downstream 2.0kb downstream 3194 true Scaffold4701: 5128-8321 Capsella grandiflora
Cagra.4701s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold4701: 6322-8321 Capsella grandiflora
Cagra.4701s0003 5.0kb upstream 5.0kb upstream 6194 true Scaffold4701: 128-6321 Capsella grandiflora
Cagra.4701s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold4701: 128-5127 Capsella grandiflora
Cagra.4701s0003 5.0kb downstream 5.0kb downstream 6194 true Scaffold4701: 5128-11321 Capsella grandiflora
Cagra.4701s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold4701: 6322-11321 Capsella grandiflora
Cagra.4701s0003 10.0kb upstream 10.0kb upstream 6321 true Scaffold4701: 1-6321 Capsella grandiflora
Cagra.4701s0003 10.0kb upstream 10.0kb upstream 5127 false Scaffold4701: 1-5127 Capsella grandiflora
Cagra.4701s0003 10.0kb downstream 10.0kb downstream 11194 true Scaffold4701: 5128-16321 Capsella grandiflora
Cagra.4701s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold4701: 6322-16321 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361335 5261 Brassicaceae View MSA
123836361 5264 Brassicales-Malvales View MSA
124340364 5266 SBM View MSA
124250412 5268 Malvidae View MSA
124050165 5270 Rosid View MSA
123752339 5271 Pentapetalae View MSA
122789611 5272 Eudicot View MSA
122051590 5273 Angiosperm View MSA
121347249 5274 Embryophyte View MSA
123426251 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain