Gene : Cagra.4713s0001 C. grandiflora v1.1
Defline:  (1 of 2) KOG0022 - Alcohol dehydrogenase, class III Genomic Order:  1
Name:  ? Cagra.4713s0001 Secondary Identifier:  ? PAC:28901504
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5486 Capsella grandiflora pathologic  
Cgrandiflora PWY-5751 Capsella grandiflora pathologic  
Cgrandiflora PWY-6333 Capsella grandiflora pathologic  
Cgrandiflora PWY66-21 Capsella grandiflora pathologic  
Cgrandiflora PWY66-389 Capsella grandiflora pathologic  
Cgrandiflora PWY-6802 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4713s0001 0.5kb upstream 0.5kb upstream 3766 true Scaffold4713: 16664-20429 Capsella grandiflora
Cagra.4713s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold4713: 19930-20429 Capsella grandiflora
Cagra.4713s0001 0.5kb downstream 0.5kb downstream 3766 true Scaffold4713: 16164-19929 Capsella grandiflora
Cagra.4713s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold4713: 16164-16663 Capsella grandiflora
Cagra.4713s0001 1.0kb upstream 1.0kb upstream 4266 true Scaffold4713: 16664-20929 Capsella grandiflora
Cagra.4713s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold4713: 19930-20929 Capsella grandiflora
Cagra.4713s0001 1.0kb downstream 1.0kb downstream 4266 true Scaffold4713: 15664-19929 Capsella grandiflora
Cagra.4713s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold4713: 15664-16663 Capsella grandiflora
Cagra.4713s0001 2.0kb upstream 2.0kb upstream 5266 true Scaffold4713: 16664-21929 Capsella grandiflora
Cagra.4713s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold4713: 19930-21929 Capsella grandiflora
Cagra.4713s0001 2.0kb downstream 2.0kb downstream 5266 true Scaffold4713: 14664-19929 Capsella grandiflora
Cagra.4713s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold4713: 14664-16663 Capsella grandiflora
Cagra.4713s0001 5.0kb upstream 5.0kb upstream 8266 true Scaffold4713: 16664-24929 Capsella grandiflora
Cagra.4713s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold4713: 19930-24929 Capsella grandiflora
Cagra.4713s0001 5.0kb downstream 5.0kb downstream 8266 true Scaffold4713: 11664-19929 Capsella grandiflora
Cagra.4713s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold4713: 11664-16663 Capsella grandiflora
Cagra.4713s0001 10.0kb upstream 10.0kb upstream 8442 true Scaffold4713: 16664-25105 Capsella grandiflora
Cagra.4713s0001 10.0kb upstream 10.0kb upstream 5176 false Scaffold4713: 19930-25105 Capsella grandiflora
Cagra.4713s0001 10.0kb downstream 10.0kb downstream 13266 true Scaffold4713: 6664-19929 Capsella grandiflora
Cagra.4713s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold4713: 6664-16663 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373655 5261 Brassicaceae View MSA
123833372 5264 Brassicales-Malvales View MSA
124342306 5266 SBM View MSA
124250138 5268 Malvidae View MSA
124072751 5270 Rosid View MSA
123744522 5271 Pentapetalae View MSA
122796931 5272 Eudicot View MSA
122046886 5273 Angiosperm View MSA
121310668 5274 Embryophyte View MSA
123428625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain