Gene : Cagra.4739s0012 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10655:SF20 - CARBOXYLESTERASE Genomic Order:  12
Name:  ? Cagra.4739s0012 Secondary Identifier:  ? PAC:28916715
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6303 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4739s0012 0.5kb upstream 0.5kb upstream 2370 true Scaffold4739: 28365-30734 Capsella grandiflora
Cagra.4739s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold4739: 30235-30734 Capsella grandiflora
Cagra.4739s0012 0.5kb downstream 0.5kb downstream 2370 true Scaffold4739: 27865-30234 Capsella grandiflora
Cagra.4739s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold4739: 27865-28364 Capsella grandiflora
Cagra.4739s0012 1.0kb upstream 1.0kb upstream 2870 true Scaffold4739: 28365-31234 Capsella grandiflora
Cagra.4739s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold4739: 30235-31234 Capsella grandiflora
Cagra.4739s0012 1.0kb downstream 1.0kb downstream 2870 true Scaffold4739: 27365-30234 Capsella grandiflora
Cagra.4739s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold4739: 27365-28364 Capsella grandiflora
Cagra.4739s0012 2.0kb upstream 2.0kb upstream 3870 true Scaffold4739: 28365-32234 Capsella grandiflora
Cagra.4739s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold4739: 30235-32234 Capsella grandiflora
Cagra.4739s0012 2.0kb downstream 2.0kb downstream 3870 true Scaffold4739: 26365-30234 Capsella grandiflora
Cagra.4739s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold4739: 26365-28364 Capsella grandiflora
Cagra.4739s0012 5.0kb upstream 5.0kb upstream 6870 true Scaffold4739: 28365-35234 Capsella grandiflora
Cagra.4739s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold4739: 30235-35234 Capsella grandiflora
Cagra.4739s0012 5.0kb downstream 5.0kb downstream 6870 true Scaffold4739: 23365-30234 Capsella grandiflora
Cagra.4739s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold4739: 23365-28364 Capsella grandiflora
Cagra.4739s0012 10.0kb upstream 10.0kb upstream 11870 true Scaffold4739: 28365-40234 Capsella grandiflora
Cagra.4739s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold4739: 30235-40234 Capsella grandiflora
Cagra.4739s0012 10.0kb downstream 10.0kb downstream 11870 true Scaffold4739: 18365-30234 Capsella grandiflora
Cagra.4739s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold4739: 18365-28364 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122338338 5261 Brassicaceae View MSA
123778926 5264 Brassicales-Malvales View MSA
124277260 5266 SBM View MSA
124132478 5268 Malvidae View MSA
124073611 5270 Rosid View MSA
123748884 5271 Pentapetalae View MSA
122786681 5272 Eudicot View MSA
122044912 5273 Angiosperm View MSA
121349351 5274 Embryophyte View MSA
123428773 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain