Gene : Cagra.4962s0004 C. grandiflora v1.1
Defline:  (1 of 1) PTHR13900 - TRANSCRIPTION INITIATION FACTOR TFIID Genomic Order:  4
Name:  ? Cagra.4962s0004 Secondary Identifier:  ? PAC:28897886
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4962s0004 0.5kb upstream 0.5kb upstream 10944 true Scaffold4962: 27075-38018 Capsella grandiflora
Cagra.4962s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold4962: 37519-38018 Capsella grandiflora
Cagra.4962s0004 0.5kb downstream 0.5kb downstream 10944 true Scaffold4962: 26575-37518 Capsella grandiflora
Cagra.4962s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold4962: 26575-27074 Capsella grandiflora
Cagra.4962s0004 1.0kb upstream 1.0kb upstream 11444 true Scaffold4962: 27075-38518 Capsella grandiflora
Cagra.4962s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold4962: 37519-38518 Capsella grandiflora
Cagra.4962s0004 1.0kb downstream 1.0kb downstream 11444 true Scaffold4962: 26075-37518 Capsella grandiflora
Cagra.4962s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold4962: 26075-27074 Capsella grandiflora
Cagra.4962s0004 2.0kb upstream 2.0kb upstream 12444 true Scaffold4962: 27075-39518 Capsella grandiflora
Cagra.4962s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold4962: 37519-39518 Capsella grandiflora
Cagra.4962s0004 2.0kb downstream 2.0kb downstream 12444 true Scaffold4962: 25075-37518 Capsella grandiflora
Cagra.4962s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold4962: 25075-27074 Capsella grandiflora
Cagra.4962s0004 5.0kb upstream 5.0kb upstream 15444 true Scaffold4962: 27075-42518 Capsella grandiflora
Cagra.4962s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold4962: 37519-42518 Capsella grandiflora
Cagra.4962s0004 5.0kb downstream 5.0kb downstream 15444 true Scaffold4962: 22075-37518 Capsella grandiflora
Cagra.4962s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold4962: 22075-27074 Capsella grandiflora
Cagra.4962s0004 10.0kb upstream 10.0kb upstream 20444 true Scaffold4962: 27075-47518 Capsella grandiflora
Cagra.4962s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold4962: 37519-47518 Capsella grandiflora
Cagra.4962s0004 10.0kb downstream 10.0kb downstream 20444 true Scaffold4962: 17075-37518 Capsella grandiflora
Cagra.4962s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold4962: 17075-27074 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373235 5261 Brassicaceae View MSA
123831121 5264 Brassicales-Malvales View MSA
124337070 5266 SBM View MSA
124251437 5268 Malvidae View MSA
124067609 5270 Rosid View MSA
123748970 5271 Pentapetalae View MSA
122794337 5272 Eudicot View MSA
122046359 5273 Angiosperm View MSA
121347140 5274 Embryophyte View MSA
123423919 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain