Gene : Cagra.4686s0003 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31614:SF13 - POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEIN Genomic Order:  3
Name:  ? Cagra.4686s0003 Secondary Identifier:  ? PAC:28920126
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4686s0003 0.5kb upstream 0.5kb upstream 1339 true Scaffold4686: 16324-17662 Capsella grandiflora
Cagra.4686s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold4686: 17163-17662 Capsella grandiflora
Cagra.4686s0003 0.5kb downstream 0.5kb downstream 1339 true Scaffold4686: 15824-17162 Capsella grandiflora
Cagra.4686s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold4686: 15824-16323 Capsella grandiflora
Cagra.4686s0003 1.0kb upstream 1.0kb upstream 1839 true Scaffold4686: 16324-18162 Capsella grandiflora
Cagra.4686s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold4686: 17163-18162 Capsella grandiflora
Cagra.4686s0003 1.0kb downstream 1.0kb downstream 1839 true Scaffold4686: 15324-17162 Capsella grandiflora
Cagra.4686s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold4686: 15324-16323 Capsella grandiflora
Cagra.4686s0003 2.0kb upstream 2.0kb upstream 2839 true Scaffold4686: 16324-19162 Capsella grandiflora
Cagra.4686s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold4686: 17163-19162 Capsella grandiflora
Cagra.4686s0003 2.0kb downstream 2.0kb downstream 2839 true Scaffold4686: 14324-17162 Capsella grandiflora
Cagra.4686s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold4686: 14324-16323 Capsella grandiflora
Cagra.4686s0003 5.0kb upstream 5.0kb upstream 5839 true Scaffold4686: 16324-22162 Capsella grandiflora
Cagra.4686s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold4686: 17163-22162 Capsella grandiflora
Cagra.4686s0003 5.0kb downstream 5.0kb downstream 5839 true Scaffold4686: 11324-17162 Capsella grandiflora
Cagra.4686s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold4686: 11324-16323 Capsella grandiflora
Cagra.4686s0003 10.0kb upstream 10.0kb upstream 10839 true Scaffold4686: 16324-27162 Capsella grandiflora
Cagra.4686s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold4686: 17163-27162 Capsella grandiflora
Cagra.4686s0003 10.0kb downstream 10.0kb downstream 10839 true Scaffold4686: 6324-17162 Capsella grandiflora
Cagra.4686s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold4686: 6324-16323 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374425 5261 Brassicaceae View MSA
123834633 5264 Brassicales-Malvales View MSA
124346039 5266 SBM View MSA
124238261 5268 Malvidae View MSA
124072733 5270 Rosid View MSA
123745578 5271 Pentapetalae View MSA
122796386 5272 Eudicot View MSA
122047345 5273 Angiosperm View MSA
121310733 5274 Embryophyte View MSA
123348146 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain