Gene : Cagra.4694s0012 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11071:SF200 - CYCLOPHILIN-LIKE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FAMILY PROTEIN-RELATED Genomic Order:  12
Name:  ? Cagra.4694s0012 Secondary Identifier:  ? PAC:28909661
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4694s0012 0.5kb upstream 0.5kb upstream 1997 true Scaffold4694: 36317-38313 Capsella grandiflora
Cagra.4694s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold4694: 37814-38313 Capsella grandiflora
Cagra.4694s0012 0.5kb downstream 0.5kb downstream 1997 true Scaffold4694: 35817-37813 Capsella grandiflora
Cagra.4694s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold4694: 35817-36316 Capsella grandiflora
Cagra.4694s0012 1.0kb upstream 1.0kb upstream 2497 true Scaffold4694: 36317-38813 Capsella grandiflora
Cagra.4694s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold4694: 37814-38813 Capsella grandiflora
Cagra.4694s0012 1.0kb downstream 1.0kb downstream 2497 true Scaffold4694: 35317-37813 Capsella grandiflora
Cagra.4694s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold4694: 35317-36316 Capsella grandiflora
Cagra.4694s0012 2.0kb upstream 2.0kb upstream 3497 true Scaffold4694: 36317-39813 Capsella grandiflora
Cagra.4694s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold4694: 37814-39813 Capsella grandiflora
Cagra.4694s0012 2.0kb downstream 2.0kb downstream 3497 true Scaffold4694: 34317-37813 Capsella grandiflora
Cagra.4694s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold4694: 34317-36316 Capsella grandiflora
Cagra.4694s0012 5.0kb upstream 5.0kb upstream 6497 true Scaffold4694: 36317-42813 Capsella grandiflora
Cagra.4694s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold4694: 37814-42813 Capsella grandiflora
Cagra.4694s0012 5.0kb downstream 5.0kb downstream 6497 true Scaffold4694: 31317-37813 Capsella grandiflora
Cagra.4694s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold4694: 31317-36316 Capsella grandiflora
Cagra.4694s0012 10.0kb upstream 10.0kb upstream 11497 true Scaffold4694: 36317-47813 Capsella grandiflora
Cagra.4694s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold4694: 37814-47813 Capsella grandiflora
Cagra.4694s0012 10.0kb downstream 10.0kb downstream 11497 true Scaffold4694: 26317-37813 Capsella grandiflora
Cagra.4694s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold4694: 26317-36316 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362646 5261 Brassicaceae View MSA
123841585 5264 Brassicales-Malvales View MSA
124345104 5266 SBM View MSA
124253889 5268 Malvidae View MSA
124066155 5270 Rosid View MSA
123744610 5271 Pentapetalae View MSA
122791251 5272 Eudicot View MSA
122046189 5273 Angiosperm View MSA
123428973 5275 Viridiplantae View MSA
121350485 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain