Gene : Cagra.6333s0009 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11751:SF126 - TRYPTOPHAN AMINOTRANSFERASE-RELATED PROTEIN 3-RELATED Genomic Order:  9
Name:  ? Cagra.6333s0009 Secondary Identifier:  ? PAC:28913551
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6333s0009 0.5kb upstream 0.5kb upstream 2222 true Scaffold6333: 34807-37028 Capsella grandiflora
Cagra.6333s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold6333: 34807-35306 Capsella grandiflora
Cagra.6333s0009 0.5kb downstream 0.5kb downstream 2222 true Scaffold6333: 35307-37528 Capsella grandiflora
Cagra.6333s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold6333: 37029-37528 Capsella grandiflora
Cagra.6333s0009 1.0kb upstream 1.0kb upstream 2722 true Scaffold6333: 34307-37028 Capsella grandiflora
Cagra.6333s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold6333: 34307-35306 Capsella grandiflora
Cagra.6333s0009 1.0kb downstream 1.0kb downstream 2722 true Scaffold6333: 35307-38028 Capsella grandiflora
Cagra.6333s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold6333: 37029-38028 Capsella grandiflora
Cagra.6333s0009 2.0kb upstream 2.0kb upstream 3722 true Scaffold6333: 33307-37028 Capsella grandiflora
Cagra.6333s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold6333: 33307-35306 Capsella grandiflora
Cagra.6333s0009 2.0kb downstream 2.0kb downstream 3722 true Scaffold6333: 35307-39028 Capsella grandiflora
Cagra.6333s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold6333: 37029-39028 Capsella grandiflora
Cagra.6333s0009 5.0kb upstream 5.0kb upstream 6722 true Scaffold6333: 30307-37028 Capsella grandiflora
Cagra.6333s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold6333: 30307-35306 Capsella grandiflora
Cagra.6333s0009 5.0kb downstream 5.0kb downstream 6106 true Scaffold6333: 35307-41412 Capsella grandiflora
Cagra.6333s0009 5.0kb downstream 5.0kb downstream 4384 false Scaffold6333: 37029-41412 Capsella grandiflora
Cagra.6333s0009 10.0kb upstream 10.0kb upstream 11722 true Scaffold6333: 25307-37028 Capsella grandiflora
Cagra.6333s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold6333: 25307-35306 Capsella grandiflora
Cagra.6333s0009 10.0kb downstream 10.0kb downstream 6106 true Scaffold6333: 35307-41412 Capsella grandiflora
Cagra.6333s0009 10.0kb downstream 10.0kb downstream 4384 false Scaffold6333: 37029-41412 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029689 5273 Angiosperm View MSA
122372994 5261 Brassicaceae View MSA
123840293 5264 Brassicales-Malvales View MSA
124348817 5266 SBM View MSA
124239139 5268 Malvidae View MSA
124068463 5270 Rosid View MSA
123752024 5271 Pentapetalae View MSA
122788339 5272 Eudicot View MSA
121345504 5274 Embryophyte View MSA
123380229 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain