Gene : Cagra.6345s0004 C. grandiflora v1.1
Defline:  (1 of 7) PF04434//PF10551 - SWIM zinc finger (SWIM) // MULE transposase domain (MULE) Genomic Order:  4
Name:  ? Cagra.6345s0004 Secondary Identifier:  ? PAC:28903264
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6345s0004 0.5kb upstream 0.5kb upstream 3286 true Scaffold6345: 12284-15569 Capsella grandiflora
Cagra.6345s0004 0.5kb upstream 0.5kb upstream 347 false Scaffold6345: 15223-15569 Capsella grandiflora
Cagra.6345s0004 0.5kb downstream 0.5kb downstream 3439 true Scaffold6345: 11784-15222 Capsella grandiflora
Cagra.6345s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold6345: 11784-12283 Capsella grandiflora
Cagra.6345s0004 1.0kb upstream 1.0kb upstream 3286 true Scaffold6345: 12284-15569 Capsella grandiflora
Cagra.6345s0004 1.0kb upstream 1.0kb upstream 347 false Scaffold6345: 15223-15569 Capsella grandiflora
Cagra.6345s0004 1.0kb downstream 1.0kb downstream 3939 true Scaffold6345: 11284-15222 Capsella grandiflora
Cagra.6345s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold6345: 11284-12283 Capsella grandiflora
Cagra.6345s0004 2.0kb upstream 2.0kb upstream 3286 true Scaffold6345: 12284-15569 Capsella grandiflora
Cagra.6345s0004 2.0kb upstream 2.0kb upstream 347 false Scaffold6345: 15223-15569 Capsella grandiflora
Cagra.6345s0004 2.0kb downstream 2.0kb downstream 4939 true Scaffold6345: 10284-15222 Capsella grandiflora
Cagra.6345s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold6345: 10284-12283 Capsella grandiflora
Cagra.6345s0004 5.0kb upstream 5.0kb upstream 3286 true Scaffold6345: 12284-15569 Capsella grandiflora
Cagra.6345s0004 5.0kb upstream 5.0kb upstream 347 false Scaffold6345: 15223-15569 Capsella grandiflora
Cagra.6345s0004 5.0kb downstream 5.0kb downstream 7939 true Scaffold6345: 7284-15222 Capsella grandiflora
Cagra.6345s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold6345: 7284-12283 Capsella grandiflora
Cagra.6345s0004 10.0kb upstream 10.0kb upstream 3286 true Scaffold6345: 12284-15569 Capsella grandiflora
Cagra.6345s0004 10.0kb upstream 10.0kb upstream 347 false Scaffold6345: 15223-15569 Capsella grandiflora
Cagra.6345s0004 10.0kb downstream 10.0kb downstream 12939 true Scaffold6345: 2284-15222 Capsella grandiflora
Cagra.6345s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold6345: 2284-12283 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380038 5261 Brassicaceae View MSA
123842361 5264 Brassicales-Malvales View MSA
124323430 5266 SBM View MSA
124169464 5268 Malvidae View MSA
124041733 5270 Rosid View MSA
123753345 5271 Pentapetalae View MSA
122797917 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain