Gene : Cagra.6369s0003 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11772:SF8 - ALUMINIUM INDUCED PROTEIN WITH YGL AND LRDR MOTIFS-RELATED Genomic Order:  3
Name:  ? Cagra.6369s0003 Secondary Identifier:  ? PAC:28913282
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6369s0003 0.5kb upstream 0.5kb upstream 2605 true Scaffold6369: 14410-17014 Capsella grandiflora
Cagra.6369s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold6369: 16515-17014 Capsella grandiflora
Cagra.6369s0003 0.5kb downstream 0.5kb downstream 2605 true Scaffold6369: 13910-16514 Capsella grandiflora
Cagra.6369s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold6369: 13910-14409 Capsella grandiflora
Cagra.6369s0003 1.0kb upstream 1.0kb upstream 3105 true Scaffold6369: 14410-17514 Capsella grandiflora
Cagra.6369s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold6369: 16515-17514 Capsella grandiflora
Cagra.6369s0003 1.0kb downstream 1.0kb downstream 3105 true Scaffold6369: 13410-16514 Capsella grandiflora
Cagra.6369s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold6369: 13410-14409 Capsella grandiflora
Cagra.6369s0003 2.0kb upstream 2.0kb upstream 4105 true Scaffold6369: 14410-18514 Capsella grandiflora
Cagra.6369s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold6369: 16515-18514 Capsella grandiflora
Cagra.6369s0003 2.0kb downstream 2.0kb downstream 4105 true Scaffold6369: 12410-16514 Capsella grandiflora
Cagra.6369s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold6369: 12410-14409 Capsella grandiflora
Cagra.6369s0003 5.0kb upstream 5.0kb upstream 7105 true Scaffold6369: 14410-21514 Capsella grandiflora
Cagra.6369s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold6369: 16515-21514 Capsella grandiflora
Cagra.6369s0003 5.0kb downstream 5.0kb downstream 7105 true Scaffold6369: 9410-16514 Capsella grandiflora
Cagra.6369s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold6369: 9410-14409 Capsella grandiflora
Cagra.6369s0003 10.0kb upstream 10.0kb upstream 12105 true Scaffold6369: 14410-26514 Capsella grandiflora
Cagra.6369s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold6369: 16515-26514 Capsella grandiflora
Cagra.6369s0003 10.0kb downstream 10.0kb downstream 12105 true Scaffold6369: 4410-16514 Capsella grandiflora
Cagra.6369s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold6369: 4410-14409 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370887 5261 Brassicaceae View MSA
123835140 5264 Brassicales-Malvales View MSA
124337817 5266 SBM View MSA
124238518 5268 Malvidae View MSA
124062275 5270 Rosid View MSA
123741924 5271 Pentapetalae View MSA
122789894 5272 Eudicot View MSA
122046778 5273 Angiosperm View MSA
121351327 5274 Embryophyte View MSA
123428842 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain