Gene : Cagra.6396s0001 C. grandiflora v1.1
Defline:  (1 of 2) PTHR13375 - FMS INTERACTING PROTEIN Genomic Order:  1
Name:  ? Cagra.6396s0001 Secondary Identifier:  ? PAC:28905965
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6396s0001 0.5kb upstream 0.5kb upstream 2234 true Scaffold6396: 1406-3639 Capsella grandiflora
Cagra.6396s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold6396: 3140-3639 Capsella grandiflora
Cagra.6396s0001 0.5kb downstream 0.5kb downstream 2234 true Scaffold6396: 906-3139 Capsella grandiflora
Cagra.6396s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold6396: 906-1405 Capsella grandiflora
Cagra.6396s0001 1.0kb upstream 1.0kb upstream 2734 true Scaffold6396: 1406-4139 Capsella grandiflora
Cagra.6396s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold6396: 3140-4139 Capsella grandiflora
Cagra.6396s0001 1.0kb downstream 1.0kb downstream 2734 true Scaffold6396: 406-3139 Capsella grandiflora
Cagra.6396s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold6396: 406-1405 Capsella grandiflora
Cagra.6396s0001 2.0kb upstream 2.0kb upstream 3734 true Scaffold6396: 1406-5139 Capsella grandiflora
Cagra.6396s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold6396: 3140-5139 Capsella grandiflora
Cagra.6396s0001 2.0kb downstream 2.0kb downstream 3139 true Scaffold6396: 1-3139 Capsella grandiflora
Cagra.6396s0001 2.0kb downstream 2.0kb downstream 1405 false Scaffold6396: 1-1405 Capsella grandiflora
Cagra.6396s0001 5.0kb upstream 5.0kb upstream 6734 true Scaffold6396: 1406-8139 Capsella grandiflora
Cagra.6396s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold6396: 3140-8139 Capsella grandiflora
Cagra.6396s0001 5.0kb downstream 5.0kb downstream 3139 true Scaffold6396: 1-3139 Capsella grandiflora
Cagra.6396s0001 5.0kb downstream 5.0kb downstream 1405 false Scaffold6396: 1-1405 Capsella grandiflora
Cagra.6396s0001 10.0kb upstream 10.0kb upstream 11734 true Scaffold6396: 1406-13139 Capsella grandiflora
Cagra.6396s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold6396: 3140-13139 Capsella grandiflora
Cagra.6396s0001 10.0kb downstream 10.0kb downstream 3139 true Scaffold6396: 1-3139 Capsella grandiflora
Cagra.6396s0001 10.0kb downstream 10.0kb downstream 1405 false Scaffold6396: 1-1405 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026540 5273 Angiosperm View MSA
122360837 5261 Brassicaceae View MSA
123798041 5264 Brassicales-Malvales View MSA
124295723 5266 SBM View MSA
124148083 5268 Malvidae View MSA
124037327 5270 Rosid View MSA
123610279 5271 Pentapetalae View MSA
122644905 5272 Eudicot View MSA
121296375 5274 Embryophyte View MSA
123425483 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain