Gene : Cagra.6415s0004 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11062:SF77 - EXOSTOSIN FAMILY PROTEIN Genomic Order:  4
Name:  ? Cagra.6415s0004 Secondary Identifier:  ? PAC:28918137
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5980 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6415s0004 0.5kb upstream 0.5kb upstream 2728 true Scaffold6415: 12634-15361 Capsella grandiflora
Cagra.6415s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold6415: 14862-15361 Capsella grandiflora
Cagra.6415s0004 0.5kb downstream 0.5kb downstream 2728 true Scaffold6415: 12134-14861 Capsella grandiflora
Cagra.6415s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold6415: 12134-12633 Capsella grandiflora
Cagra.6415s0004 1.0kb upstream 1.0kb upstream 3228 true Scaffold6415: 12634-15861 Capsella grandiflora
Cagra.6415s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold6415: 14862-15861 Capsella grandiflora
Cagra.6415s0004 1.0kb downstream 1.0kb downstream 3228 true Scaffold6415: 11634-14861 Capsella grandiflora
Cagra.6415s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold6415: 11634-12633 Capsella grandiflora
Cagra.6415s0004 2.0kb upstream 2.0kb upstream 4228 true Scaffold6415: 12634-16861 Capsella grandiflora
Cagra.6415s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold6415: 14862-16861 Capsella grandiflora
Cagra.6415s0004 2.0kb downstream 2.0kb downstream 4228 true Scaffold6415: 10634-14861 Capsella grandiflora
Cagra.6415s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold6415: 10634-12633 Capsella grandiflora
Cagra.6415s0004 5.0kb upstream 5.0kb upstream 6667 true Scaffold6415: 12634-19300 Capsella grandiflora
Cagra.6415s0004 5.0kb upstream 5.0kb upstream 4439 false Scaffold6415: 14862-19300 Capsella grandiflora
Cagra.6415s0004 5.0kb downstream 5.0kb downstream 7228 true Scaffold6415: 7634-14861 Capsella grandiflora
Cagra.6415s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold6415: 7634-12633 Capsella grandiflora
Cagra.6415s0004 10.0kb upstream 10.0kb upstream 6667 true Scaffold6415: 12634-19300 Capsella grandiflora
Cagra.6415s0004 10.0kb upstream 10.0kb upstream 4439 false Scaffold6415: 14862-19300 Capsella grandiflora
Cagra.6415s0004 10.0kb downstream 10.0kb downstream 12228 true Scaffold6415: 2634-14861 Capsella grandiflora
Cagra.6415s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold6415: 2634-12633 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792376 5273 Angiosperm View MSA
122371641 5261 Brassicaceae View MSA
123837076 5264 Brassicales-Malvales View MSA
124348425 5266 SBM View MSA
124245963 5268 Malvidae View MSA
124069541 5270 Rosid View MSA
123742009 5271 Pentapetalae View MSA
122797581 5272 Eudicot View MSA
121349832 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain