Gene : Cagra.6254s0042 C. grandiflora v1.1
Defline:  (1 of 1) 2.4.2.18 - Anthranilate phosphoribosyltransferase / Phosphoribosyl-anthranilate pyrophosphorylase Genomic Order:  42
Name:  ? Cagra.6254s0042 Secondary Identifier:  ? PAC:28897578
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora TRPSYN-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6254s0042 0.5kb upstream 0.5kb upstream 3240 true Scaffold6254: 151640-154879 Capsella grandiflora
Cagra.6254s0042 0.5kb upstream 0.5kb upstream 500 false Scaffold6254: 151640-152139 Capsella grandiflora
Cagra.6254s0042 0.5kb downstream 0.5kb downstream 3240 true Scaffold6254: 152140-155379 Capsella grandiflora
Cagra.6254s0042 0.5kb downstream 0.5kb downstream 500 false Scaffold6254: 154880-155379 Capsella grandiflora
Cagra.6254s0042 1.0kb upstream 1.0kb upstream 3740 true Scaffold6254: 151140-154879 Capsella grandiflora
Cagra.6254s0042 1.0kb upstream 1.0kb upstream 1000 false Scaffold6254: 151140-152139 Capsella grandiflora
Cagra.6254s0042 1.0kb downstream 1.0kb downstream 3740 true Scaffold6254: 152140-155879 Capsella grandiflora
Cagra.6254s0042 1.0kb downstream 1.0kb downstream 1000 false Scaffold6254: 154880-155879 Capsella grandiflora
Cagra.6254s0042 2.0kb upstream 2.0kb upstream 4740 true Scaffold6254: 150140-154879 Capsella grandiflora
Cagra.6254s0042 2.0kb upstream 2.0kb upstream 2000 false Scaffold6254: 150140-152139 Capsella grandiflora
Cagra.6254s0042 2.0kb downstream 2.0kb downstream 4740 true Scaffold6254: 152140-156879 Capsella grandiflora
Cagra.6254s0042 2.0kb downstream 2.0kb downstream 2000 false Scaffold6254: 154880-156879 Capsella grandiflora
Cagra.6254s0042 5.0kb upstream 5.0kb upstream 7740 true Scaffold6254: 147140-154879 Capsella grandiflora
Cagra.6254s0042 5.0kb upstream 5.0kb upstream 5000 false Scaffold6254: 147140-152139 Capsella grandiflora
Cagra.6254s0042 5.0kb downstream 5.0kb downstream 7740 true Scaffold6254: 152140-159879 Capsella grandiflora
Cagra.6254s0042 5.0kb downstream 5.0kb downstream 5000 false Scaffold6254: 154880-159879 Capsella grandiflora
Cagra.6254s0042 10.0kb upstream 10.0kb upstream 12740 true Scaffold6254: 142140-154879 Capsella grandiflora
Cagra.6254s0042 10.0kb upstream 10.0kb upstream 10000 false Scaffold6254: 142140-152139 Capsella grandiflora
Cagra.6254s0042 10.0kb downstream 10.0kb downstream 12740 true Scaffold6254: 152140-164879 Capsella grandiflora
Cagra.6254s0042 10.0kb downstream 10.0kb downstream 10000 false Scaffold6254: 154880-164879 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363791 5261 Brassicaceae View MSA
123839950 5264 Brassicales-Malvales View MSA
124345413 5266 SBM View MSA
124243489 5268 Malvidae View MSA
124063634 5270 Rosid View MSA
123740526 5271 Pentapetalae View MSA
122797383 5272 Eudicot View MSA
122046938 5273 Angiosperm View MSA
121344269 5274 Embryophyte View MSA
123424710 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain