Gene : Cagra.6296s0001 C. grandiflora v1.1
Defline:  (1 of 2) 3.2.1.37//3.2.1.55 - Xylan 1,4-beta-xylosidase / Xylobiase // Non-reducing end alpha-L-arabinofuranosidase / Arabinosidase Genomic Order:  1
Name:  ? Cagra.6296s0001 Secondary Identifier:  ? PAC:28899576
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6296s0001 0.5kb upstream 0.5kb upstream 5086 true Scaffold6296: 5961-11046 Capsella grandiflora
Cagra.6296s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold6296: 5961-6460 Capsella grandiflora
Cagra.6296s0001 0.5kb downstream 0.5kb downstream 5086 true Scaffold6296: 6461-11546 Capsella grandiflora
Cagra.6296s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold6296: 11047-11546 Capsella grandiflora
Cagra.6296s0001 1.0kb upstream 1.0kb upstream 5586 true Scaffold6296: 5461-11046 Capsella grandiflora
Cagra.6296s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold6296: 5461-6460 Capsella grandiflora
Cagra.6296s0001 1.0kb downstream 1.0kb downstream 5586 true Scaffold6296: 6461-12046 Capsella grandiflora
Cagra.6296s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold6296: 11047-12046 Capsella grandiflora
Cagra.6296s0001 2.0kb upstream 2.0kb upstream 6586 true Scaffold6296: 4461-11046 Capsella grandiflora
Cagra.6296s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold6296: 4461-6460 Capsella grandiflora
Cagra.6296s0001 2.0kb downstream 2.0kb downstream 6586 true Scaffold6296: 6461-13046 Capsella grandiflora
Cagra.6296s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold6296: 11047-13046 Capsella grandiflora
Cagra.6296s0001 5.0kb upstream 5.0kb upstream 9586 true Scaffold6296: 1461-11046 Capsella grandiflora
Cagra.6296s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold6296: 1461-6460 Capsella grandiflora
Cagra.6296s0001 5.0kb downstream 5.0kb downstream 9586 true Scaffold6296: 6461-16046 Capsella grandiflora
Cagra.6296s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold6296: 11047-16046 Capsella grandiflora
Cagra.6296s0001 10.0kb upstream 10.0kb upstream 11046 true Scaffold6296: 1-11046 Capsella grandiflora
Cagra.6296s0001 10.0kb upstream 10.0kb upstream 6460 false Scaffold6296: 1-6460 Capsella grandiflora
Cagra.6296s0001 10.0kb downstream 10.0kb downstream 14586 true Scaffold6296: 6461-21046 Capsella grandiflora
Cagra.6296s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold6296: 11047-21046 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371327 5261 Brassicaceae View MSA
123828897 5264 Brassicales-Malvales View MSA
124341988 5266 SBM View MSA
124250711 5268 Malvidae View MSA
124066127 5270 Rosid View MSA
123744774 5271 Pentapetalae View MSA
122789153 5272 Eudicot View MSA
122047485 5273 Angiosperm View MSA
121349595 5274 Embryophyte View MSA
123381370 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain