Gene : Cagra.6011s0003 C. grandiflora v1.1
Defline:  (1 of 3) PTHR31692:SF3 - BETA EXPANSIN 6-RELATED Genomic Order:  3
Name:  ? Cagra.6011s0003 Secondary Identifier:  ? PAC:28895834
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6011s0003 0.5kb upstream 0.5kb upstream 1679 true Scaffold6011: 13106-14784 Capsella grandiflora
Cagra.6011s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold6011: 13106-13605 Capsella grandiflora
Cagra.6011s0003 0.5kb downstream 0.5kb downstream 1679 true Scaffold6011: 13606-15284 Capsella grandiflora
Cagra.6011s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold6011: 14785-15284 Capsella grandiflora
Cagra.6011s0003 1.0kb upstream 1.0kb upstream 2179 true Scaffold6011: 12606-14784 Capsella grandiflora
Cagra.6011s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold6011: 12606-13605 Capsella grandiflora
Cagra.6011s0003 1.0kb downstream 1.0kb downstream 2179 true Scaffold6011: 13606-15784 Capsella grandiflora
Cagra.6011s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold6011: 14785-15784 Capsella grandiflora
Cagra.6011s0003 2.0kb upstream 2.0kb upstream 3179 true Scaffold6011: 11606-14784 Capsella grandiflora
Cagra.6011s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold6011: 11606-13605 Capsella grandiflora
Cagra.6011s0003 2.0kb downstream 2.0kb downstream 3179 true Scaffold6011: 13606-16784 Capsella grandiflora
Cagra.6011s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold6011: 14785-16784 Capsella grandiflora
Cagra.6011s0003 5.0kb upstream 5.0kb upstream 6179 true Scaffold6011: 8606-14784 Capsella grandiflora
Cagra.6011s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold6011: 8606-13605 Capsella grandiflora
Cagra.6011s0003 5.0kb downstream 5.0kb downstream 6179 true Scaffold6011: 13606-19784 Capsella grandiflora
Cagra.6011s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold6011: 14785-19784 Capsella grandiflora
Cagra.6011s0003 10.0kb upstream 10.0kb upstream 11179 true Scaffold6011: 3606-14784 Capsella grandiflora
Cagra.6011s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold6011: 3606-13605 Capsella grandiflora
Cagra.6011s0003 10.0kb downstream 10.0kb downstream 11179 true Scaffold6011: 13606-24784 Capsella grandiflora
Cagra.6011s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold6011: 14785-24784 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372721 5261 Brassicaceae View MSA
123838866 5264 Brassicales-Malvales View MSA
124342817 5266 SBM View MSA
124250972 5268 Malvidae View MSA
124072515 5270 Rosid View MSA
123741696 5271 Pentapetalae View MSA
122794529 5272 Eudicot View MSA
122049839 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351768 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain