Gene : Cagra.6011s0013 C. grandiflora v1.1
Defline:  (1 of 12) PF04640 - PLATZ transcription factor (PLATZ) Genomic Order:  13
Name:  ? Cagra.6011s0013 Secondary Identifier:  ? PAC:28895851
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6011s0013 0.5kb upstream 0.5kb upstream 2048 true Scaffold6011: 43703-45750 Capsella grandiflora
Cagra.6011s0013 0.5kb upstream 0.5kb upstream 500 false Scaffold6011: 45251-45750 Capsella grandiflora
Cagra.6011s0013 0.5kb downstream 0.5kb downstream 2048 true Scaffold6011: 43203-45250 Capsella grandiflora
Cagra.6011s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold6011: 43203-43702 Capsella grandiflora
Cagra.6011s0013 1.0kb upstream 1.0kb upstream 2548 true Scaffold6011: 43703-46250 Capsella grandiflora
Cagra.6011s0013 1.0kb upstream 1.0kb upstream 1000 false Scaffold6011: 45251-46250 Capsella grandiflora
Cagra.6011s0013 1.0kb downstream 1.0kb downstream 2548 true Scaffold6011: 42703-45250 Capsella grandiflora
Cagra.6011s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold6011: 42703-43702 Capsella grandiflora
Cagra.6011s0013 2.0kb upstream 2.0kb upstream 3548 true Scaffold6011: 43703-47250 Capsella grandiflora
Cagra.6011s0013 2.0kb upstream 2.0kb upstream 2000 false Scaffold6011: 45251-47250 Capsella grandiflora
Cagra.6011s0013 2.0kb downstream 2.0kb downstream 3548 true Scaffold6011: 41703-45250 Capsella grandiflora
Cagra.6011s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold6011: 41703-43702 Capsella grandiflora
Cagra.6011s0013 5.0kb upstream 5.0kb upstream 6548 true Scaffold6011: 43703-50250 Capsella grandiflora
Cagra.6011s0013 5.0kb upstream 5.0kb upstream 5000 false Scaffold6011: 45251-50250 Capsella grandiflora
Cagra.6011s0013 5.0kb downstream 5.0kb downstream 6548 true Scaffold6011: 38703-45250 Capsella grandiflora
Cagra.6011s0013 5.0kb downstream 5.0kb downstream 5000 false Scaffold6011: 38703-43702 Capsella grandiflora
Cagra.6011s0013 10.0kb upstream 10.0kb upstream 11548 true Scaffold6011: 43703-55250 Capsella grandiflora
Cagra.6011s0013 10.0kb upstream 10.0kb upstream 10000 false Scaffold6011: 45251-55250 Capsella grandiflora
Cagra.6011s0013 10.0kb downstream 10.0kb downstream 11548 true Scaffold6011: 33703-45250 Capsella grandiflora
Cagra.6011s0013 10.0kb downstream 10.0kb downstream 10000 false Scaffold6011: 33703-43702 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368964 5261 Brassicaceae View MSA
123835234 5264 Brassicales-Malvales View MSA
124343314 5266 SBM View MSA
124253522 5268 Malvidae View MSA
124069177 5270 Rosid View MSA
123750215 5271 Pentapetalae View MSA
122789413 5272 Eudicot View MSA
122043598 5273 Angiosperm View MSA
121349888 5274 Embryophyte View MSA
123428703 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain