Gene : Cagra.6054s0005 C. grandiflora v1.1
Defline:  (1 of 1) 2.7.7.3 - Pantetheine-phosphate adenylyltransferase / PPAT Genomic Order:  5
Name:  ? Cagra.6054s0005 Secondary Identifier:  ? PAC:28902620
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora COA-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6054s0005 0.5kb upstream 0.5kb upstream 1860 true Scaffold6054: 17746-19605 Capsella grandiflora
Cagra.6054s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold6054: 19106-19605 Capsella grandiflora
Cagra.6054s0005 0.5kb downstream 0.5kb downstream 1860 true Scaffold6054: 17246-19105 Capsella grandiflora
Cagra.6054s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold6054: 17246-17745 Capsella grandiflora
Cagra.6054s0005 1.0kb upstream 1.0kb upstream 2360 true Scaffold6054: 17746-20105 Capsella grandiflora
Cagra.6054s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold6054: 19106-20105 Capsella grandiflora
Cagra.6054s0005 1.0kb downstream 1.0kb downstream 2360 true Scaffold6054: 16746-19105 Capsella grandiflora
Cagra.6054s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold6054: 16746-17745 Capsella grandiflora
Cagra.6054s0005 2.0kb upstream 2.0kb upstream 3360 true Scaffold6054: 17746-21105 Capsella grandiflora
Cagra.6054s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold6054: 19106-21105 Capsella grandiflora
Cagra.6054s0005 2.0kb downstream 2.0kb downstream 3360 true Scaffold6054: 15746-19105 Capsella grandiflora
Cagra.6054s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold6054: 15746-17745 Capsella grandiflora
Cagra.6054s0005 5.0kb upstream 5.0kb upstream 6360 true Scaffold6054: 17746-24105 Capsella grandiflora
Cagra.6054s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold6054: 19106-24105 Capsella grandiflora
Cagra.6054s0005 5.0kb downstream 5.0kb downstream 6360 true Scaffold6054: 12746-19105 Capsella grandiflora
Cagra.6054s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold6054: 12746-17745 Capsella grandiflora
Cagra.6054s0005 10.0kb upstream 10.0kb upstream 6740 true Scaffold6054: 17746-24485 Capsella grandiflora
Cagra.6054s0005 10.0kb upstream 10.0kb upstream 5380 false Scaffold6054: 19106-24485 Capsella grandiflora
Cagra.6054s0005 10.0kb downstream 10.0kb downstream 11360 true Scaffold6054: 7746-19105 Capsella grandiflora
Cagra.6054s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold6054: 7746-17745 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370429 5261 Brassicaceae View MSA
123835109 5264 Brassicales-Malvales View MSA
124343022 5266 SBM View MSA
124241332 5268 Malvidae View MSA
124064108 5270 Rosid View MSA
123751907 5271 Pentapetalae View MSA
122795383 5272 Eudicot View MSA
122050871 5273 Angiosperm View MSA
121345308 5274 Embryophyte View MSA
123425957 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain