Gene : Cagra.6152s0002 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24012:SF349 - POLYADENYLATE-BINDING PROTEIN 2-RELATED Genomic Order:  2
Name:  ? Cagra.6152s0002 Secondary Identifier:  ? PAC:28919995
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6152s0002 0.5kb upstream 0.5kb upstream 3822 true Scaffold6152: 2502-6323 Capsella grandiflora
Cagra.6152s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold6152: 2502-3001 Capsella grandiflora
Cagra.6152s0002 0.5kb downstream 0.5kb downstream 3822 true Scaffold6152: 3002-6823 Capsella grandiflora
Cagra.6152s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold6152: 6324-6823 Capsella grandiflora
Cagra.6152s0002 1.0kb upstream 1.0kb upstream 4322 true Scaffold6152: 2002-6323 Capsella grandiflora
Cagra.6152s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold6152: 2002-3001 Capsella grandiflora
Cagra.6152s0002 1.0kb downstream 1.0kb downstream 4322 true Scaffold6152: 3002-7323 Capsella grandiflora
Cagra.6152s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold6152: 6324-7323 Capsella grandiflora
Cagra.6152s0002 2.0kb upstream 2.0kb upstream 5322 true Scaffold6152: 1002-6323 Capsella grandiflora
Cagra.6152s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold6152: 1002-3001 Capsella grandiflora
Cagra.6152s0002 2.0kb downstream 2.0kb downstream 5322 true Scaffold6152: 3002-8323 Capsella grandiflora
Cagra.6152s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold6152: 6324-8323 Capsella grandiflora
Cagra.6152s0002 5.0kb upstream 5.0kb upstream 6323 true Scaffold6152: 1-6323 Capsella grandiflora
Cagra.6152s0002 5.0kb upstream 5.0kb upstream 3001 false Scaffold6152: 1-3001 Capsella grandiflora
Cagra.6152s0002 5.0kb downstream 5.0kb downstream 8322 true Scaffold6152: 3002-11323 Capsella grandiflora
Cagra.6152s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold6152: 6324-11323 Capsella grandiflora
Cagra.6152s0002 10.0kb upstream 10.0kb upstream 6323 true Scaffold6152: 1-6323 Capsella grandiflora
Cagra.6152s0002 10.0kb upstream 10.0kb upstream 3001 false Scaffold6152: 1-3001 Capsella grandiflora
Cagra.6152s0002 10.0kb downstream 10.0kb downstream 13322 true Scaffold6152: 3002-16323 Capsella grandiflora
Cagra.6152s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold6152: 6324-16323 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364632 5261 Brassicaceae View MSA
123828243 5264 Brassicales-Malvales View MSA
124346994 5266 SBM View MSA
124249647 5268 Malvidae View MSA
124070544 5270 Rosid View MSA
123741893 5271 Pentapetalae View MSA
122797353 5272 Eudicot View MSA
122046831 5273 Angiosperm View MSA
121349622 5274 Embryophyte View MSA
123428043 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain