Gene : Cagra.6160s0006 C. grandiflora v1.1
Defline:  (1 of 3) PTHR15348 - AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT Genomic Order:  6
Name:  ? Cagra.6160s0006 Secondary Identifier:  ? PAC:28912753
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6160s0006 0.5kb upstream 0.5kb upstream 4543 true Scaffold6160: 26855-31397 Capsella grandiflora
Cagra.6160s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold6160: 26855-27354 Capsella grandiflora
Cagra.6160s0006 0.5kb downstream 0.5kb downstream 4543 true Scaffold6160: 27355-31897 Capsella grandiflora
Cagra.6160s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold6160: 31398-31897 Capsella grandiflora
Cagra.6160s0006 1.0kb upstream 1.0kb upstream 5043 true Scaffold6160: 26355-31397 Capsella grandiflora
Cagra.6160s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold6160: 26355-27354 Capsella grandiflora
Cagra.6160s0006 1.0kb downstream 1.0kb downstream 5043 true Scaffold6160: 27355-32397 Capsella grandiflora
Cagra.6160s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold6160: 31398-32397 Capsella grandiflora
Cagra.6160s0006 2.0kb upstream 2.0kb upstream 6043 true Scaffold6160: 25355-31397 Capsella grandiflora
Cagra.6160s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold6160: 25355-27354 Capsella grandiflora
Cagra.6160s0006 2.0kb downstream 2.0kb downstream 6043 true Scaffold6160: 27355-33397 Capsella grandiflora
Cagra.6160s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold6160: 31398-33397 Capsella grandiflora
Cagra.6160s0006 5.0kb upstream 5.0kb upstream 9043 true Scaffold6160: 22355-31397 Capsella grandiflora
Cagra.6160s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold6160: 22355-27354 Capsella grandiflora
Cagra.6160s0006 5.0kb downstream 5.0kb downstream 9043 true Scaffold6160: 27355-36397 Capsella grandiflora
Cagra.6160s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold6160: 31398-36397 Capsella grandiflora
Cagra.6160s0006 10.0kb upstream 10.0kb upstream 14043 true Scaffold6160: 17355-31397 Capsella grandiflora
Cagra.6160s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold6160: 17355-27354 Capsella grandiflora
Cagra.6160s0006 10.0kb downstream 10.0kb downstream 14043 true Scaffold6160: 27355-41397 Capsella grandiflora
Cagra.6160s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold6160: 31398-41397 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363466 5261 Brassicaceae View MSA
123798549 5264 Brassicales-Malvales View MSA
124296172 5266 SBM View MSA
124250971 5268 Malvidae View MSA
124071452 5270 Rosid View MSA
123742990 5271 Pentapetalae View MSA
122787773 5272 Eudicot View MSA
122045434 5273 Angiosperm View MSA
121346901 5274 Embryophyte View MSA
123426327 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain