Gene : Cagra.5890s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR22814:SF51 - HEAVY METAL TRANSPORT/DETOXIFICATION DOMAIN-CONTAINING PROTEIN Genomic Order:  1
Name:  ? Cagra.5890s0001 Secondary Identifier:  ? PAC:28897931
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5890s0001 0.5kb upstream 0.5kb upstream 2311 true Scaffold5890: 2643-4953 Capsella grandiflora
Cagra.5890s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold5890: 4454-4953 Capsella grandiflora
Cagra.5890s0001 0.5kb downstream 0.5kb downstream 2311 true Scaffold5890: 2143-4453 Capsella grandiflora
Cagra.5890s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold5890: 2143-2642 Capsella grandiflora
Cagra.5890s0001 1.0kb upstream 1.0kb upstream 2811 true Scaffold5890: 2643-5453 Capsella grandiflora
Cagra.5890s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold5890: 4454-5453 Capsella grandiflora
Cagra.5890s0001 1.0kb downstream 1.0kb downstream 2811 true Scaffold5890: 1643-4453 Capsella grandiflora
Cagra.5890s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold5890: 1643-2642 Capsella grandiflora
Cagra.5890s0001 2.0kb upstream 2.0kb upstream 3811 true Scaffold5890: 2643-6453 Capsella grandiflora
Cagra.5890s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold5890: 4454-6453 Capsella grandiflora
Cagra.5890s0001 2.0kb downstream 2.0kb downstream 3811 true Scaffold5890: 643-4453 Capsella grandiflora
Cagra.5890s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold5890: 643-2642 Capsella grandiflora
Cagra.5890s0001 5.0kb upstream 5.0kb upstream 6426 true Scaffold5890: 2643-9068 Capsella grandiflora
Cagra.5890s0001 5.0kb upstream 5.0kb upstream 4615 false Scaffold5890: 4454-9068 Capsella grandiflora
Cagra.5890s0001 5.0kb downstream 5.0kb downstream 4453 true Scaffold5890: 1-4453 Capsella grandiflora
Cagra.5890s0001 5.0kb downstream 5.0kb downstream 2642 false Scaffold5890: 1-2642 Capsella grandiflora
Cagra.5890s0001 10.0kb upstream 10.0kb upstream 6426 true Scaffold5890: 2643-9068 Capsella grandiflora
Cagra.5890s0001 10.0kb upstream 10.0kb upstream 4615 false Scaffold5890: 4454-9068 Capsella grandiflora
Cagra.5890s0001 10.0kb downstream 10.0kb downstream 4453 true Scaffold5890: 1-4453 Capsella grandiflora
Cagra.5890s0001 10.0kb downstream 10.0kb downstream 2642 false Scaffold5890: 1-2642 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122334046 5261 Brassicaceae Singleton cluster - no MSA
123774929 5264 Brassicales-Malvales Singleton cluster - no MSA
124273349 5266 SBM Singleton cluster - no MSA
124249747 5268 Malvidae View MSA
124070367 5270 Rosid View MSA
123750804 5271 Pentapetalae View MSA
122795172 5272 Eudicot View MSA
122041833 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain