Gene : Cagra.5961s0005 C. grandiflora v1.1
Defline:  (1 of 7) PF03909 - BSD domain (BSD) Genomic Order:  5
Name:  ? Cagra.5961s0005 Secondary Identifier:  ? PAC:28894302
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5961s0005 0.5kb upstream 0.5kb upstream 2363 true Scaffold5961: 24941-27303 Capsella grandiflora
Cagra.5961s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold5961: 24941-25440 Capsella grandiflora
Cagra.5961s0005 0.5kb downstream 0.5kb downstream 2363 true Scaffold5961: 25441-27803 Capsella grandiflora
Cagra.5961s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold5961: 27304-27803 Capsella grandiflora
Cagra.5961s0005 1.0kb upstream 1.0kb upstream 2863 true Scaffold5961: 24441-27303 Capsella grandiflora
Cagra.5961s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold5961: 24441-25440 Capsella grandiflora
Cagra.5961s0005 1.0kb downstream 1.0kb downstream 2863 true Scaffold5961: 25441-28303 Capsella grandiflora
Cagra.5961s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold5961: 27304-28303 Capsella grandiflora
Cagra.5961s0005 2.0kb upstream 2.0kb upstream 3863 true Scaffold5961: 23441-27303 Capsella grandiflora
Cagra.5961s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold5961: 23441-25440 Capsella grandiflora
Cagra.5961s0005 2.0kb downstream 2.0kb downstream 3863 true Scaffold5961: 25441-29303 Capsella grandiflora
Cagra.5961s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold5961: 27304-29303 Capsella grandiflora
Cagra.5961s0005 5.0kb upstream 5.0kb upstream 6863 true Scaffold5961: 20441-27303 Capsella grandiflora
Cagra.5961s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold5961: 20441-25440 Capsella grandiflora
Cagra.5961s0005 5.0kb downstream 5.0kb downstream 6863 true Scaffold5961: 25441-32303 Capsella grandiflora
Cagra.5961s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold5961: 27304-32303 Capsella grandiflora
Cagra.5961s0005 10.0kb upstream 10.0kb upstream 11863 true Scaffold5961: 15441-27303 Capsella grandiflora
Cagra.5961s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold5961: 15441-25440 Capsella grandiflora
Cagra.5961s0005 10.0kb downstream 10.0kb downstream 11392 true Scaffold5961: 25441-36832 Capsella grandiflora
Cagra.5961s0005 10.0kb downstream 10.0kb downstream 9529 false Scaffold5961: 27304-36832 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362374 5261 Brassicaceae View MSA
123829894 5264 Brassicales-Malvales View MSA
124344299 5266 SBM View MSA
124240103 5268 Malvidae View MSA
124061374 5270 Rosid View MSA
123737420 5271 Pentapetalae View MSA
122787609 5272 Eudicot View MSA
122050169 5273 Angiosperm View MSA
121311775 5274 Embryophyte View MSA
123349027 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain