Gene : Cagra.5641s0011 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10252//PTHR10252:SF40 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED Genomic Order:  11
Name:  ? Cagra.5641s0011 Secondary Identifier:  ? PAC:28908436
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5641s0011 0.5kb upstream 0.5kb upstream 2861 true Scaffold5641: 21192-24052 Capsella grandiflora
Cagra.5641s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold5641: 21192-21691 Capsella grandiflora
Cagra.5641s0011 0.5kb downstream 0.5kb downstream 2861 true Scaffold5641: 21692-24552 Capsella grandiflora
Cagra.5641s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold5641: 24053-24552 Capsella grandiflora
Cagra.5641s0011 1.0kb upstream 1.0kb upstream 3361 true Scaffold5641: 20692-24052 Capsella grandiflora
Cagra.5641s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold5641: 20692-21691 Capsella grandiflora
Cagra.5641s0011 1.0kb downstream 1.0kb downstream 3361 true Scaffold5641: 21692-25052 Capsella grandiflora
Cagra.5641s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold5641: 24053-25052 Capsella grandiflora
Cagra.5641s0011 2.0kb upstream 2.0kb upstream 4361 true Scaffold5641: 19692-24052 Capsella grandiflora
Cagra.5641s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold5641: 19692-21691 Capsella grandiflora
Cagra.5641s0011 2.0kb downstream 2.0kb downstream 4361 true Scaffold5641: 21692-26052 Capsella grandiflora
Cagra.5641s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold5641: 24053-26052 Capsella grandiflora
Cagra.5641s0011 5.0kb upstream 5.0kb upstream 7361 true Scaffold5641: 16692-24052 Capsella grandiflora
Cagra.5641s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold5641: 16692-21691 Capsella grandiflora
Cagra.5641s0011 5.0kb downstream 5.0kb downstream 7361 true Scaffold5641: 21692-29052 Capsella grandiflora
Cagra.5641s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold5641: 24053-29052 Capsella grandiflora
Cagra.5641s0011 10.0kb upstream 10.0kb upstream 12361 true Scaffold5641: 11692-24052 Capsella grandiflora
Cagra.5641s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold5641: 11692-21691 Capsella grandiflora
Cagra.5641s0011 10.0kb downstream 10.0kb downstream 12361 true Scaffold5641: 21692-34052 Capsella grandiflora
Cagra.5641s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold5641: 24053-34052 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378115 5261 Brassicaceae View MSA
123827798 5264 Brassicales-Malvales View MSA
124346080 5266 SBM View MSA
124244953 5268 Malvidae View MSA
124069286 5270 Rosid View MSA
123742462 5271 Pentapetalae View MSA
122792661 5272 Eudicot View MSA
122049084 5273 Angiosperm View MSA
123429029 5275 Viridiplantae View MSA
121345521 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain