Gene : Cagra.5641s0028 C. grandiflora v1.1
Defline:  (1 of 2) PF00076//PF01480 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // PWI domain (PWI) Genomic Order:  28
Name:  ? Cagra.5641s0028 Secondary Identifier:  ? PAC:28908459
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5641s0028 0.5kb upstream 0.5kb upstream 3886 true Scaffold5641: 78623-82508 Capsella grandiflora
Cagra.5641s0028 0.5kb upstream 0.5kb upstream 500 false Scaffold5641: 78623-79122 Capsella grandiflora
Cagra.5641s0028 0.5kb downstream 0.5kb downstream 3886 true Scaffold5641: 79123-83008 Capsella grandiflora
Cagra.5641s0028 0.5kb downstream 0.5kb downstream 500 false Scaffold5641: 82509-83008 Capsella grandiflora
Cagra.5641s0028 1.0kb upstream 1.0kb upstream 4386 true Scaffold5641: 78123-82508 Capsella grandiflora
Cagra.5641s0028 1.0kb upstream 1.0kb upstream 1000 false Scaffold5641: 78123-79122 Capsella grandiflora
Cagra.5641s0028 1.0kb downstream 1.0kb downstream 4386 true Scaffold5641: 79123-83508 Capsella grandiflora
Cagra.5641s0028 1.0kb downstream 1.0kb downstream 1000 false Scaffold5641: 82509-83508 Capsella grandiflora
Cagra.5641s0028 2.0kb upstream 2.0kb upstream 5386 true Scaffold5641: 77123-82508 Capsella grandiflora
Cagra.5641s0028 2.0kb upstream 2.0kb upstream 2000 false Scaffold5641: 77123-79122 Capsella grandiflora
Cagra.5641s0028 2.0kb downstream 2.0kb downstream 5386 true Scaffold5641: 79123-84508 Capsella grandiflora
Cagra.5641s0028 2.0kb downstream 2.0kb downstream 2000 false Scaffold5641: 82509-84508 Capsella grandiflora
Cagra.5641s0028 5.0kb upstream 5.0kb upstream 8386 true Scaffold5641: 74123-82508 Capsella grandiflora
Cagra.5641s0028 5.0kb upstream 5.0kb upstream 5000 false Scaffold5641: 74123-79122 Capsella grandiflora
Cagra.5641s0028 5.0kb downstream 5.0kb downstream 8386 true Scaffold5641: 79123-87508 Capsella grandiflora
Cagra.5641s0028 5.0kb downstream 5.0kb downstream 5000 false Scaffold5641: 82509-87508 Capsella grandiflora
Cagra.5641s0028 10.0kb upstream 10.0kb upstream 13386 true Scaffold5641: 69123-82508 Capsella grandiflora
Cagra.5641s0028 10.0kb upstream 10.0kb upstream 10000 false Scaffold5641: 69123-79122 Capsella grandiflora
Cagra.5641s0028 10.0kb downstream 10.0kb downstream 13386 true Scaffold5641: 79123-92508 Capsella grandiflora
Cagra.5641s0028 10.0kb downstream 10.0kb downstream 10000 false Scaffold5641: 82509-92508 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380128 5261 Brassicaceae View MSA
123831995 5264 Brassicales-Malvales View MSA
124343516 5266 SBM View MSA
124243375 5268 Malvidae View MSA
124060657 5270 Rosid View MSA
123744402 5271 Pentapetalae View MSA
122787071 5272 Eudicot View MSA
122046161 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121345767 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain