Protein Family : RNA binding (RRM/RBD/RNP motifs) family protein 124243375

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  23

23 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30152.t000017 (1 of 2) KOG0122 - Translation initiation factor 3, subunit g (eIF-3g) R. communis v0.1 3345   30152: 608815-612159
orange1.1g010695m.g (1 of 4) PF01480 - PWI domain (PWI) C. sinensis v1.1 3821   scaffold00003: 4108998-4112818
AT3G12640 (1 of 2) PF00076//PF01480 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // PWI domain (PWI) A. thaliana TAIR10 3657   Chr3: 4014213-4017869
Thhalv10020251m.g (1 of 1) KOG3702 - Nuclear polyadenylated RNA binding protein E. salsugineum v1.0 3103   scaffold_13: 5340204-5343306
Ciclev10033914m.g (1 of 1) KOG3702 - Nuclear polyadenylated RNA binding protein C. clementina v1.0 5580   scaffold_4: 25071431-25077010
Lus10037701.g (1 of 2) KOG3702 - Nuclear polyadenylated RNA binding protein L. usitatissimum v1.0 3932   scaffold196: 1133406-1137337
Lus10015696.g (1 of 2) KOG3702 - Nuclear polyadenylated RNA binding protein L. usitatissimum v1.0 4306   scaffold630: 495721-500026
Gorai.004G036800 (1 of 1) KOG3702 - Nuclear polyadenylated RNA binding protein G. raimondii v2.1 5456   Chr04: 3006294-3011749
Thecc1EG005903 (1 of 1) KOG3702 - Nuclear polyadenylated RNA binding protein T. cacao v1.1 5911   scaffold_1: 38734597-38740507
Araha.11737s0016 (1 of 3) PF00076//PF01480 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // PWI domain (PWI) A. halleri v1.1 3483   Scaffold11737: 59387-62869
Cagra.5641s0028 (1 of 2) PF00076//PF01480 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // PWI domain (PWI) C. grandiflora v1.1 3386   Scaffold5641: 79123-82508
Brara.A03324 (1 of 2) KOG3702 - Nuclear polyadenylated RNA binding protein B. rapa FPsc v1.3 3378   A01: 27566846-27570223
Brara.C03426 (1 of 2) KOG3702 - Nuclear polyadenylated RNA binding protein B. rapa FPsc v1.3 3264   A03: 17332230-17335493
Bostr.3640s0037 (1 of 2) PF00076//PF01480 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // PWI domain (PWI) B. stricta v1.2 3789   Scaffold3640: 128643-132431
SapurV1A.0027s0170 (1 of 3) KOG3702 - Nuclear polyadenylated RNA binding protein S. purpurea v1.0 6177   chr09: 5125127-5131303
SapurV1A.0111s0090 (1 of 3) KOG3702 - Nuclear polyadenylated RNA binding protein S. purpurea v1.0 7005   chr16: 15153379-15160383
Manes.10G145600 (1 of 1) KOG3702 - Nuclear polyadenylated RNA binding protein M. esculenta v6.1 8292   Chromosome10: 25648888-25657179
AL3G24310 (1 of 3) PF00076//PF01480 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // PWI domain (PWI) A. lyrata v2.1 3602   scaffold_3: 5057918-5061519
Potri.001G269200 (1 of 2) KOG3702 - Nuclear polyadenylated RNA binding protein P. trichocarpa v3.1 7360   Chr01: 27680114-27687473
Potri.009G063800 (1 of 2) KOG3702 - Nuclear polyadenylated RNA binding protein P. trichocarpa v3.1 7133   Chr09: 6486140-6493272
Podel.01G286200 (1 of 2) KOG3702 - Nuclear polyadenylated RNA binding protein P. deltoides WV94 v2.1 7739   Chr01: 29436466-29444204
Podel.09G065500 (1 of 2) KOG3702 - Nuclear polyadenylated RNA binding protein P. deltoides WV94 v2.1 7255   Chr09: 6508741-6515995
Carub.0003s1199 (1 of 2) PF00076//PF01480 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // PWI domain (PWI) C. rubella v1.1 3634   scaffold_3: 4111389-4115022

23 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
30152.m002396 R. communis v0.1 124243375 RNA binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
Lus10037701 L. usitatissimum v1.0 124243375 RNA binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
SapurV1A.0027s0170.1.p S. purpurea v1.0 124243375 RNA binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
Manes.10G145600.1.p M. esculenta v6.1 124243375 RNA binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
AL3G24310.t1 A. lyrata v2.1 124243375 RNA binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
Podel.09G065500.1.p P. deltoides WV94 v2.1 124243375 RNA binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
orange1.1g010695m C. sinensis v1.1 124243375 RNA binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
AT3G12640.1 A. thaliana TAIR10 124243375 RNA binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
Thhalv10020251m E. salsugineum v1.0 124243375 RNA binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
Ciclev10033914m C. clementina v1.0 124243375 RNA binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
Lus10015696 L. usitatissimum v1.0 124243375 RNA binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
Gorai.004G036800.1 G. raimondii v2.1 124243375 RNA binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
Thecc1EG005903t1 T. cacao v1.1 124243375 RNA binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
Araha.11737s0016.1.p A. halleri v1.1 124243375 RNA binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
Cagra.5641s0028.1.p C. grandiflora v1.1 124243375 RNA binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
Brara.A03324.1.p B. rapa FPsc v1.3 124243375 RNA binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
Brara.C03426.1.p B. rapa FPsc v1.3 124243375 RNA binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
Bostr.3640s0037.1.p B. stricta v1.2 124243375 RNA binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
SapurV1A.0111s0090.1.p S. purpurea v1.0 124243375 RNA binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
Potri.001G269200.1.p P. trichocarpa v3.1 124243375 RNA binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
Potri.009G063800.1.p P. trichocarpa v3.1 124243375 RNA binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
Podel.01G286200.1.p P. deltoides WV94 v2.1 124243375 RNA binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
Carub.0003s1199.1.p C. rubella v1.1 124243375 RNA binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae