Gene : Cagra.5742s0011 C. grandiflora v1.1
Defline:  (1 of 1) PTHR33925:SF2 - PLASTID DIVISION PROTEIN CDP1, CHLOROPLASTIC Genomic Order:  11
Name:  ? Cagra.5742s0011 Secondary Identifier:  ? PAC:28905204
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5742s0011 0.5kb upstream 0.5kb upstream 5433 true Scaffold5742: 40763-46195 Capsella grandiflora
Cagra.5742s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold5742: 45696-46195 Capsella grandiflora
Cagra.5742s0011 0.5kb downstream 0.5kb downstream 5433 true Scaffold5742: 40263-45695 Capsella grandiflora
Cagra.5742s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold5742: 40263-40762 Capsella grandiflora
Cagra.5742s0011 1.0kb upstream 1.0kb upstream 5933 true Scaffold5742: 40763-46695 Capsella grandiflora
Cagra.5742s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold5742: 45696-46695 Capsella grandiflora
Cagra.5742s0011 1.0kb downstream 1.0kb downstream 5933 true Scaffold5742: 39763-45695 Capsella grandiflora
Cagra.5742s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold5742: 39763-40762 Capsella grandiflora
Cagra.5742s0011 2.0kb upstream 2.0kb upstream 6933 true Scaffold5742: 40763-47695 Capsella grandiflora
Cagra.5742s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold5742: 45696-47695 Capsella grandiflora
Cagra.5742s0011 2.0kb downstream 2.0kb downstream 6933 true Scaffold5742: 38763-45695 Capsella grandiflora
Cagra.5742s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold5742: 38763-40762 Capsella grandiflora
Cagra.5742s0011 5.0kb upstream 5.0kb upstream 9933 true Scaffold5742: 40763-50695 Capsella grandiflora
Cagra.5742s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold5742: 45696-50695 Capsella grandiflora
Cagra.5742s0011 5.0kb downstream 5.0kb downstream 9933 true Scaffold5742: 35763-45695 Capsella grandiflora
Cagra.5742s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold5742: 35763-40762 Capsella grandiflora
Cagra.5742s0011 10.0kb upstream 10.0kb upstream 14933 true Scaffold5742: 40763-55695 Capsella grandiflora
Cagra.5742s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold5742: 45696-55695 Capsella grandiflora
Cagra.5742s0011 10.0kb downstream 10.0kb downstream 14933 true Scaffold5742: 30763-45695 Capsella grandiflora
Cagra.5742s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold5742: 30763-40762 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365800 5261 Brassicaceae View MSA
123828732 5264 Brassicales-Malvales View MSA
124346215 5266 SBM View MSA
124237714 5268 Malvidae View MSA
124060775 5270 Rosid View MSA
123739322 5271 Pentapetalae View MSA
122788542 5272 Eudicot View MSA
122051144 5273 Angiosperm View MSA
121351206 5274 Embryophyte View MSA
123426631 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain