Gene : Cagra.5575s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR16212:SF4 - FOCADHESIN Genomic Order:  2
Name:  ? Cagra.5575s0002 Secondary Identifier:  ? PAC:28903653
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5575s0002 0.5kb upstream 0.5kb upstream 9104 true Scaffold5575: 2473-11576 Capsella grandiflora
Cagra.5575s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold5575: 11077-11576 Capsella grandiflora
Cagra.5575s0002 0.5kb downstream 0.5kb downstream 9104 true Scaffold5575: 1973-11076 Capsella grandiflora
Cagra.5575s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold5575: 1973-2472 Capsella grandiflora
Cagra.5575s0002 1.0kb upstream 1.0kb upstream 9604 true Scaffold5575: 2473-12076 Capsella grandiflora
Cagra.5575s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold5575: 11077-12076 Capsella grandiflora
Cagra.5575s0002 1.0kb downstream 1.0kb downstream 9604 true Scaffold5575: 1473-11076 Capsella grandiflora
Cagra.5575s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold5575: 1473-2472 Capsella grandiflora
Cagra.5575s0002 2.0kb upstream 2.0kb upstream 10604 true Scaffold5575: 2473-13076 Capsella grandiflora
Cagra.5575s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold5575: 11077-13076 Capsella grandiflora
Cagra.5575s0002 2.0kb downstream 2.0kb downstream 10604 true Scaffold5575: 473-11076 Capsella grandiflora
Cagra.5575s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold5575: 473-2472 Capsella grandiflora
Cagra.5575s0002 5.0kb upstream 5.0kb upstream 13604 true Scaffold5575: 2473-16076 Capsella grandiflora
Cagra.5575s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold5575: 11077-16076 Capsella grandiflora
Cagra.5575s0002 5.0kb downstream 5.0kb downstream 11076 true Scaffold5575: 1-11076 Capsella grandiflora
Cagra.5575s0002 5.0kb downstream 5.0kb downstream 2472 false Scaffold5575: 1-2472 Capsella grandiflora
Cagra.5575s0002 10.0kb upstream 10.0kb upstream 18604 true Scaffold5575: 2473-21076 Capsella grandiflora
Cagra.5575s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold5575: 11077-21076 Capsella grandiflora
Cagra.5575s0002 10.0kb downstream 10.0kb downstream 11076 true Scaffold5575: 1-11076 Capsella grandiflora
Cagra.5575s0002 10.0kb downstream 10.0kb downstream 2472 false Scaffold5575: 1-2472 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365602 5261 Brassicaceae View MSA
123830481 5264 Brassicales-Malvales View MSA
124342414 5266 SBM View MSA
124247658 5268 Malvidae View MSA
124073528 5270 Rosid View MSA
123737254 5271 Pentapetalae View MSA
122792826 5272 Eudicot View MSA
122044820 5273 Angiosperm View MSA
121344294 5274 Embryophyte View MSA
123424915 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain