Gene : Cagra.5560s0001 C. grandiflora v1.1
Defline:  (1 of 3) PTHR11697:SF110 - GENERAL TRANSCRIPTION FACTOR 2-RELATED ZINC FINGER PROTEIN-RELATED Genomic Order:  1
Name:  ? Cagra.5560s0001 Secondary Identifier:  ? PAC:28911742
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5560s0001 0.5kb upstream 0.5kb upstream 2538 true Scaffold5560: 6-2543 Capsella grandiflora
Cagra.5560s0001 0.5kb upstream 0.5kb upstream 216 false Scaffold5560: 2328-2543 Capsella grandiflora
Cagra.5560s0001 0.5kb downstream 0.5kb downstream 2327 true Scaffold5560: 1-2327 Capsella grandiflora
Cagra.5560s0001 0.5kb downstream 0.5kb downstream 5 false Scaffold5560: 1-5 Capsella grandiflora
Cagra.5560s0001 1.0kb upstream 1.0kb upstream 2538 true Scaffold5560: 6-2543 Capsella grandiflora
Cagra.5560s0001 1.0kb upstream 1.0kb upstream 216 false Scaffold5560: 2328-2543 Capsella grandiflora
Cagra.5560s0001 1.0kb downstream 1.0kb downstream 2327 true Scaffold5560: 1-2327 Capsella grandiflora
Cagra.5560s0001 1.0kb downstream 1.0kb downstream 5 false Scaffold5560: 1-5 Capsella grandiflora
Cagra.5560s0001 2.0kb upstream 2.0kb upstream 2538 true Scaffold5560: 6-2543 Capsella grandiflora
Cagra.5560s0001 2.0kb upstream 2.0kb upstream 216 false Scaffold5560: 2328-2543 Capsella grandiflora
Cagra.5560s0001 2.0kb downstream 2.0kb downstream 2327 true Scaffold5560: 1-2327 Capsella grandiflora
Cagra.5560s0001 2.0kb downstream 2.0kb downstream 5 false Scaffold5560: 1-5 Capsella grandiflora
Cagra.5560s0001 5.0kb upstream 5.0kb upstream 2538 true Scaffold5560: 6-2543 Capsella grandiflora
Cagra.5560s0001 5.0kb upstream 5.0kb upstream 216 false Scaffold5560: 2328-2543 Capsella grandiflora
Cagra.5560s0001 5.0kb downstream 5.0kb downstream 2327 true Scaffold5560: 1-2327 Capsella grandiflora
Cagra.5560s0001 5.0kb downstream 5.0kb downstream 5 false Scaffold5560: 1-5 Capsella grandiflora
Cagra.5560s0001 10.0kb upstream 10.0kb upstream 2538 true Scaffold5560: 6-2543 Capsella grandiflora
Cagra.5560s0001 10.0kb upstream 10.0kb upstream 216 false Scaffold5560: 2328-2543 Capsella grandiflora
Cagra.5560s0001 10.0kb downstream 10.0kb downstream 2327 true Scaffold5560: 1-2327 Capsella grandiflora
Cagra.5560s0001 10.0kb downstream 10.0kb downstream 5 false Scaffold5560: 1-5 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029782 5273 Angiosperm View MSA
122380609 5261 Brassicaceae View MSA
123840892 5264 Brassicales-Malvales View MSA
124351584 5266 SBM View MSA
124253841 5268 Malvidae View MSA
124040410 5270 Rosid View MSA
123752938 5271 Pentapetalae View MSA
122797889 5272 Eudicot View MSA
121351340 5274 Embryophyte View MSA
123426120 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain