Gene : Cagra.5588s0006 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11945//PTHR11945:SF237 - MADS BOX PROTEIN Genomic Order:  6
Name:  ? Cagra.5588s0006 Secondary Identifier:  ? PAC:28914607
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5588s0006 0.5kb upstream 0.5kb upstream 2187 true Scaffold5588: 18736-20922 Capsella grandiflora
Cagra.5588s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold5588: 20423-20922 Capsella grandiflora
Cagra.5588s0006 0.5kb downstream 0.5kb downstream 2187 true Scaffold5588: 18236-20422 Capsella grandiflora
Cagra.5588s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold5588: 18236-18735 Capsella grandiflora
Cagra.5588s0006 1.0kb upstream 1.0kb upstream 2687 true Scaffold5588: 18736-21422 Capsella grandiflora
Cagra.5588s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold5588: 20423-21422 Capsella grandiflora
Cagra.5588s0006 1.0kb downstream 1.0kb downstream 2687 true Scaffold5588: 17736-20422 Capsella grandiflora
Cagra.5588s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold5588: 17736-18735 Capsella grandiflora
Cagra.5588s0006 2.0kb upstream 2.0kb upstream 3687 true Scaffold5588: 18736-22422 Capsella grandiflora
Cagra.5588s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold5588: 20423-22422 Capsella grandiflora
Cagra.5588s0006 2.0kb downstream 2.0kb downstream 3687 true Scaffold5588: 16736-20422 Capsella grandiflora
Cagra.5588s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold5588: 16736-18735 Capsella grandiflora
Cagra.5588s0006 5.0kb upstream 5.0kb upstream 6687 true Scaffold5588: 18736-25422 Capsella grandiflora
Cagra.5588s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold5588: 20423-25422 Capsella grandiflora
Cagra.5588s0006 5.0kb downstream 5.0kb downstream 6687 true Scaffold5588: 13736-20422 Capsella grandiflora
Cagra.5588s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold5588: 13736-18735 Capsella grandiflora
Cagra.5588s0006 10.0kb upstream 10.0kb upstream 11687 true Scaffold5588: 18736-30422 Capsella grandiflora
Cagra.5588s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold5588: 20423-30422 Capsella grandiflora
Cagra.5588s0006 10.0kb downstream 10.0kb downstream 11687 true Scaffold5588: 8736-20422 Capsella grandiflora
Cagra.5588s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold5588: 8736-18735 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372629 5261 Brassicaceae View MSA
123835944 5264 Brassicales-Malvales View MSA
124341091 5266 SBM View MSA
124248714 5268 Malvidae View MSA
124074630 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain