Gene : Cagra.5414s0002 C. grandiflora v1.1
Defline:  (1 of 16) PF04782//PF04783 - Protein of unknown function (DUF632) (DUF632) // Protein of unknown function (DUF630) (DUF630) Genomic Order:  2
Name:  ? Cagra.5414s0002 Secondary Identifier:  ? PAC:28913629
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5414s0002 0.5kb upstream 0.5kb upstream 2839 true Scaffold5414: 4978-7816 Capsella grandiflora
Cagra.5414s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold5414: 7317-7816 Capsella grandiflora
Cagra.5414s0002 0.5kb downstream 0.5kb downstream 2839 true Scaffold5414: 4478-7316 Capsella grandiflora
Cagra.5414s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold5414: 4478-4977 Capsella grandiflora
Cagra.5414s0002 1.0kb upstream 1.0kb upstream 3339 true Scaffold5414: 4978-8316 Capsella grandiflora
Cagra.5414s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold5414: 7317-8316 Capsella grandiflora
Cagra.5414s0002 1.0kb downstream 1.0kb downstream 3339 true Scaffold5414: 3978-7316 Capsella grandiflora
Cagra.5414s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold5414: 3978-4977 Capsella grandiflora
Cagra.5414s0002 2.0kb upstream 2.0kb upstream 4339 true Scaffold5414: 4978-9316 Capsella grandiflora
Cagra.5414s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold5414: 7317-9316 Capsella grandiflora
Cagra.5414s0002 2.0kb downstream 2.0kb downstream 4339 true Scaffold5414: 2978-7316 Capsella grandiflora
Cagra.5414s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold5414: 2978-4977 Capsella grandiflora
Cagra.5414s0002 5.0kb upstream 5.0kb upstream 7339 true Scaffold5414: 4978-12316 Capsella grandiflora
Cagra.5414s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold5414: 7317-12316 Capsella grandiflora
Cagra.5414s0002 5.0kb downstream 5.0kb downstream 7316 true Scaffold5414: 1-7316 Capsella grandiflora
Cagra.5414s0002 5.0kb downstream 5.0kb downstream 4977 false Scaffold5414: 1-4977 Capsella grandiflora
Cagra.5414s0002 10.0kb upstream 10.0kb upstream 12339 true Scaffold5414: 4978-17316 Capsella grandiflora
Cagra.5414s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold5414: 7317-17316 Capsella grandiflora
Cagra.5414s0002 10.0kb downstream 10.0kb downstream 7316 true Scaffold5414: 1-7316 Capsella grandiflora
Cagra.5414s0002 10.0kb downstream 10.0kb downstream 4977 false Scaffold5414: 1-4977 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375653 5261 Brassicaceae View MSA
123835195 5264 Brassicales-Malvales View MSA
124339262 5266 SBM View MSA
124240110 5268 Malvidae View MSA
124066962 5270 Rosid View MSA
123745138 5271 Pentapetalae View MSA
122787240 5272 Eudicot View MSA
122051058 5273 Angiosperm View MSA
121350303 5274 Embryophyte View MSA
123381668 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain