Gene : Cagra.5414s0023 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10992//PTHR10992:SF792 - ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN Genomic Order:  23
Name:  ? Cagra.5414s0023 Secondary Identifier:  ? PAC:28913640
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora LIPAS-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5414s0023 0.5kb upstream 0.5kb upstream 1943 true Scaffold5414: 74556-76498 Capsella grandiflora
Cagra.5414s0023 0.5kb upstream 0.5kb upstream 500 false Scaffold5414: 74556-75055 Capsella grandiflora
Cagra.5414s0023 0.5kb downstream 0.5kb downstream 1943 true Scaffold5414: 75056-76998 Capsella grandiflora
Cagra.5414s0023 0.5kb downstream 0.5kb downstream 500 false Scaffold5414: 76499-76998 Capsella grandiflora
Cagra.5414s0023 1.0kb upstream 1.0kb upstream 2443 true Scaffold5414: 74056-76498 Capsella grandiflora
Cagra.5414s0023 1.0kb upstream 1.0kb upstream 1000 false Scaffold5414: 74056-75055 Capsella grandiflora
Cagra.5414s0023 1.0kb downstream 1.0kb downstream 2443 true Scaffold5414: 75056-77498 Capsella grandiflora
Cagra.5414s0023 1.0kb downstream 1.0kb downstream 1000 false Scaffold5414: 76499-77498 Capsella grandiflora
Cagra.5414s0023 2.0kb upstream 2.0kb upstream 3443 true Scaffold5414: 73056-76498 Capsella grandiflora
Cagra.5414s0023 2.0kb upstream 2.0kb upstream 2000 false Scaffold5414: 73056-75055 Capsella grandiflora
Cagra.5414s0023 2.0kb downstream 2.0kb downstream 3443 true Scaffold5414: 75056-78498 Capsella grandiflora
Cagra.5414s0023 2.0kb downstream 2.0kb downstream 2000 false Scaffold5414: 76499-78498 Capsella grandiflora
Cagra.5414s0023 5.0kb upstream 5.0kb upstream 6443 true Scaffold5414: 70056-76498 Capsella grandiflora
Cagra.5414s0023 5.0kb upstream 5.0kb upstream 5000 false Scaffold5414: 70056-75055 Capsella grandiflora
Cagra.5414s0023 5.0kb downstream 5.0kb downstream 6443 true Scaffold5414: 75056-81498 Capsella grandiflora
Cagra.5414s0023 5.0kb downstream 5.0kb downstream 5000 false Scaffold5414: 76499-81498 Capsella grandiflora
Cagra.5414s0023 10.0kb upstream 10.0kb upstream 11443 true Scaffold5414: 65056-76498 Capsella grandiflora
Cagra.5414s0023 10.0kb upstream 10.0kb upstream 10000 false Scaffold5414: 65056-75055 Capsella grandiflora
Cagra.5414s0023 10.0kb downstream 10.0kb downstream 11443 true Scaffold5414: 75056-86498 Capsella grandiflora
Cagra.5414s0023 10.0kb downstream 10.0kb downstream 10000 false Scaffold5414: 76499-86498 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367140 5261 Brassicaceae View MSA
123841298 5264 Brassicales-Malvales View MSA
124342133 5266 SBM View MSA
124239723 5268 Malvidae View MSA
124070444 5270 Rosid View MSA
123749753 5271 Pentapetalae View MSA
122790165 5272 Eudicot View MSA
122050369 5273 Angiosperm View MSA
123428977 5275 Viridiplantae View MSA
121351643 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain