Gene : Cagra.5447s0005 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10887:SF338 - P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN Genomic Order:  5
Name:  ? Cagra.5447s0005 Secondary Identifier:  ? PAC:28909766
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5447s0005 0.5kb upstream 0.5kb upstream 2633 true Scaffold5447: 10693-13325 Capsella grandiflora
Cagra.5447s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold5447: 10693-11192 Capsella grandiflora
Cagra.5447s0005 0.5kb downstream 0.5kb downstream 2633 true Scaffold5447: 11193-13825 Capsella grandiflora
Cagra.5447s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold5447: 13326-13825 Capsella grandiflora
Cagra.5447s0005 1.0kb upstream 1.0kb upstream 3133 true Scaffold5447: 10193-13325 Capsella grandiflora
Cagra.5447s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold5447: 10193-11192 Capsella grandiflora
Cagra.5447s0005 1.0kb downstream 1.0kb downstream 3133 true Scaffold5447: 11193-14325 Capsella grandiflora
Cagra.5447s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold5447: 13326-14325 Capsella grandiflora
Cagra.5447s0005 2.0kb upstream 2.0kb upstream 4133 true Scaffold5447: 9193-13325 Capsella grandiflora
Cagra.5447s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold5447: 9193-11192 Capsella grandiflora
Cagra.5447s0005 2.0kb downstream 2.0kb downstream 4133 true Scaffold5447: 11193-15325 Capsella grandiflora
Cagra.5447s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold5447: 13326-15325 Capsella grandiflora
Cagra.5447s0005 5.0kb upstream 5.0kb upstream 7133 true Scaffold5447: 6193-13325 Capsella grandiflora
Cagra.5447s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold5447: 6193-11192 Capsella grandiflora
Cagra.5447s0005 5.0kb downstream 5.0kb downstream 7133 true Scaffold5447: 11193-18325 Capsella grandiflora
Cagra.5447s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold5447: 13326-18325 Capsella grandiflora
Cagra.5447s0005 10.0kb upstream 10.0kb upstream 12133 true Scaffold5447: 1193-13325 Capsella grandiflora
Cagra.5447s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold5447: 1193-11192 Capsella grandiflora
Cagra.5447s0005 10.0kb downstream 10.0kb downstream 12133 true Scaffold5447: 11193-23325 Capsella grandiflora
Cagra.5447s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold5447: 13326-23325 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381585 5261 Brassicaceae View MSA
123840274 5264 Brassicales-Malvales View MSA
124338028 5266 SBM View MSA
124253750 5268 Malvidae View MSA
124072227 5270 Rosid View MSA
123753543 5271 Pentapetalae View MSA
122797869 5272 Eudicot View MSA
122048393 5273 Angiosperm View MSA
123429092 5275 Viridiplantae View MSA
121348032 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain