Gene : Cagra.5449s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR13268:SF0 - BREAST CARCINOMA-AMPLIFIED SEQUENCE 3 Genomic Order:  1
Name:  ? Cagra.5449s0001 Secondary Identifier:  ? PAC:28904391
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5449s0001 0.5kb upstream 0.5kb upstream 5225 true Scaffold5449: 601-5825 Capsella grandiflora
Cagra.5449s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold5449: 5326-5825 Capsella grandiflora
Cagra.5449s0001 0.5kb downstream 0.5kb downstream 5225 true Scaffold5449: 101-5325 Capsella grandiflora
Cagra.5449s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold5449: 101-600 Capsella grandiflora
Cagra.5449s0001 1.0kb upstream 1.0kb upstream 5725 true Scaffold5449: 601-6325 Capsella grandiflora
Cagra.5449s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold5449: 5326-6325 Capsella grandiflora
Cagra.5449s0001 1.0kb downstream 1.0kb downstream 5325 true Scaffold5449: 1-5325 Capsella grandiflora
Cagra.5449s0001 1.0kb downstream 1.0kb downstream 600 false Scaffold5449: 1-600 Capsella grandiflora
Cagra.5449s0001 2.0kb upstream 2.0kb upstream 6725 true Scaffold5449: 601-7325 Capsella grandiflora
Cagra.5449s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold5449: 5326-7325 Capsella grandiflora
Cagra.5449s0001 2.0kb downstream 2.0kb downstream 5325 true Scaffold5449: 1-5325 Capsella grandiflora
Cagra.5449s0001 2.0kb downstream 2.0kb downstream 600 false Scaffold5449: 1-600 Capsella grandiflora
Cagra.5449s0001 5.0kb upstream 5.0kb upstream 9593 true Scaffold5449: 601-10193 Capsella grandiflora
Cagra.5449s0001 5.0kb upstream 5.0kb upstream 4868 false Scaffold5449: 5326-10193 Capsella grandiflora
Cagra.5449s0001 5.0kb downstream 5.0kb downstream 5325 true Scaffold5449: 1-5325 Capsella grandiflora
Cagra.5449s0001 5.0kb downstream 5.0kb downstream 600 false Scaffold5449: 1-600 Capsella grandiflora
Cagra.5449s0001 10.0kb upstream 10.0kb upstream 9593 true Scaffold5449: 601-10193 Capsella grandiflora
Cagra.5449s0001 10.0kb upstream 10.0kb upstream 4868 false Scaffold5449: 5326-10193 Capsella grandiflora
Cagra.5449s0001 10.0kb downstream 10.0kb downstream 5325 true Scaffold5449: 1-5325 Capsella grandiflora
Cagra.5449s0001 10.0kb downstream 10.0kb downstream 600 false Scaffold5449: 1-600 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364473 5261 Brassicaceae View MSA
123840872 5264 Brassicales-Malvales View MSA
124348014 5266 SBM View MSA
124245951 5268 Malvidae View MSA
124063703 5270 Rosid View MSA
123744735 5271 Pentapetalae View MSA
122790134 5272 Eudicot View MSA
122047922 5273 Angiosperm View MSA
121350059 5274 Embryophyte View MSA
123424091 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain