Gene : Cagra.7102s0005 C. grandiflora v1.1
Defline:  (1 of 2) PTHR22880:SF134 - TRANSCRIPTION FACTOR GTE8-RELATED Genomic Order:  5
Name:  ? Cagra.7102s0005 Secondary Identifier:  ? PAC:28920213
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.7102s0005 0.5kb upstream 0.5kb upstream 5598 true Scaffold7102: 18139-23736 Capsella grandiflora
Cagra.7102s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold7102: 23237-23736 Capsella grandiflora
Cagra.7102s0005 0.5kb downstream 0.5kb downstream 5598 true Scaffold7102: 17639-23236 Capsella grandiflora
Cagra.7102s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold7102: 17639-18138 Capsella grandiflora
Cagra.7102s0005 1.0kb upstream 1.0kb upstream 6098 true Scaffold7102: 18139-24236 Capsella grandiflora
Cagra.7102s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold7102: 23237-24236 Capsella grandiflora
Cagra.7102s0005 1.0kb downstream 1.0kb downstream 6098 true Scaffold7102: 17139-23236 Capsella grandiflora
Cagra.7102s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold7102: 17139-18138 Capsella grandiflora
Cagra.7102s0005 2.0kb upstream 2.0kb upstream 6574 true Scaffold7102: 18139-24712 Capsella grandiflora
Cagra.7102s0005 2.0kb upstream 2.0kb upstream 1476 false Scaffold7102: 23237-24712 Capsella grandiflora
Cagra.7102s0005 2.0kb downstream 2.0kb downstream 7098 true Scaffold7102: 16139-23236 Capsella grandiflora
Cagra.7102s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold7102: 16139-18138 Capsella grandiflora
Cagra.7102s0005 5.0kb upstream 5.0kb upstream 6574 true Scaffold7102: 18139-24712 Capsella grandiflora
Cagra.7102s0005 5.0kb upstream 5.0kb upstream 1476 false Scaffold7102: 23237-24712 Capsella grandiflora
Cagra.7102s0005 5.0kb downstream 5.0kb downstream 10098 true Scaffold7102: 13139-23236 Capsella grandiflora
Cagra.7102s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold7102: 13139-18138 Capsella grandiflora
Cagra.7102s0005 10.0kb upstream 10.0kb upstream 6574 true Scaffold7102: 18139-24712 Capsella grandiflora
Cagra.7102s0005 10.0kb upstream 10.0kb upstream 1476 false Scaffold7102: 23237-24712 Capsella grandiflora
Cagra.7102s0005 10.0kb downstream 10.0kb downstream 15098 true Scaffold7102: 8139-23236 Capsella grandiflora
Cagra.7102s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold7102: 8139-18138 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373553 5261 Brassicaceae View MSA
123831663 5264 Brassicales-Malvales View MSA
124341556 5266 SBM View MSA
124251619 5268 Malvidae View MSA
124067873 5270 Rosid View MSA
123742171 5271 Pentapetalae View MSA
122795525 5272 Eudicot View MSA
122044532 5273 Angiosperm View MSA
123429103 5275 Viridiplantae View MSA
121347470 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain