Gene : Cagra.7148s0001 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24362:SF258 - SERINE/THREONINE-PROTEIN KINASE NEK5 Genomic Order:  1
Name:  ? Cagra.7148s0001 Secondary Identifier:  ? PAC:28904608
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.7148s0001 0.5kb upstream 0.5kb upstream 4614 true Scaffold7148: 3252-7865 Capsella grandiflora
Cagra.7148s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold7148: 7366-7865 Capsella grandiflora
Cagra.7148s0001 0.5kb downstream 0.5kb downstream 4614 true Scaffold7148: 2752-7365 Capsella grandiflora
Cagra.7148s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold7148: 2752-3251 Capsella grandiflora
Cagra.7148s0001 1.0kb upstream 1.0kb upstream 5114 true Scaffold7148: 3252-8365 Capsella grandiflora
Cagra.7148s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold7148: 7366-8365 Capsella grandiflora
Cagra.7148s0001 1.0kb downstream 1.0kb downstream 5114 true Scaffold7148: 2252-7365 Capsella grandiflora
Cagra.7148s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold7148: 2252-3251 Capsella grandiflora
Cagra.7148s0001 2.0kb upstream 2.0kb upstream 5528 true Scaffold7148: 3252-8779 Capsella grandiflora
Cagra.7148s0001 2.0kb upstream 2.0kb upstream 1414 false Scaffold7148: 7366-8779 Capsella grandiflora
Cagra.7148s0001 2.0kb downstream 2.0kb downstream 6114 true Scaffold7148: 1252-7365 Capsella grandiflora
Cagra.7148s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold7148: 1252-3251 Capsella grandiflora
Cagra.7148s0001 5.0kb upstream 5.0kb upstream 5528 true Scaffold7148: 3252-8779 Capsella grandiflora
Cagra.7148s0001 5.0kb upstream 5.0kb upstream 1414 false Scaffold7148: 7366-8779 Capsella grandiflora
Cagra.7148s0001 5.0kb downstream 5.0kb downstream 7365 true Scaffold7148: 1-7365 Capsella grandiflora
Cagra.7148s0001 5.0kb downstream 5.0kb downstream 3251 false Scaffold7148: 1-3251 Capsella grandiflora
Cagra.7148s0001 10.0kb upstream 10.0kb upstream 5528 true Scaffold7148: 3252-8779 Capsella grandiflora
Cagra.7148s0001 10.0kb upstream 10.0kb upstream 1414 false Scaffold7148: 7366-8779 Capsella grandiflora
Cagra.7148s0001 10.0kb downstream 10.0kb downstream 7365 true Scaffold7148: 1-7365 Capsella grandiflora
Cagra.7148s0001 10.0kb downstream 10.0kb downstream 3251 false Scaffold7148: 1-3251 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122334235 5261 Brassicaceae Singleton cluster - no MSA
123839261 5264 Brassicales-Malvales View MSA
124340083 5266 SBM View MSA
124248486 5268 Malvidae View MSA
124063961 5270 Rosid View MSA
123747232 5271 Pentapetalae View MSA
122789599 5272 Eudicot View MSA
122047293 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351770 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain