Gene : Cagra.7247s0002 C. grandiflora v1.1
Defline:  (1 of 2) PTHR18866:SF106 - ACETYL-COA CARBOXYLASE 1 Genomic Order:  2
Name:  ? Cagra.7247s0002 Secondary Identifier:  ? PAC:28917648
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY0-1264 Capsella grandiflora pathologic  
Cgrandiflora PWY-4381 Capsella grandiflora pathologic  
Cgrandiflora PWY-5156 Capsella grandiflora pathologic  
Cgrandiflora PWY-7388 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.7247s0002 0.5kb upstream 0.5kb upstream 11268 true Scaffold7247: 16174-27441 Capsella grandiflora
Cagra.7247s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold7247: 16174-16673 Capsella grandiflora
Cagra.7247s0002 0.5kb downstream 0.5kb downstream 11268 true Scaffold7247: 16674-27941 Capsella grandiflora
Cagra.7247s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold7247: 27442-27941 Capsella grandiflora
Cagra.7247s0002 1.0kb upstream 1.0kb upstream 11768 true Scaffold7247: 15674-27441 Capsella grandiflora
Cagra.7247s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold7247: 15674-16673 Capsella grandiflora
Cagra.7247s0002 1.0kb downstream 1.0kb downstream 11768 true Scaffold7247: 16674-28441 Capsella grandiflora
Cagra.7247s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold7247: 27442-28441 Capsella grandiflora
Cagra.7247s0002 2.0kb upstream 2.0kb upstream 12768 true Scaffold7247: 14674-27441 Capsella grandiflora
Cagra.7247s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold7247: 14674-16673 Capsella grandiflora
Cagra.7247s0002 2.0kb downstream 2.0kb downstream 12768 true Scaffold7247: 16674-29441 Capsella grandiflora
Cagra.7247s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold7247: 27442-29441 Capsella grandiflora
Cagra.7247s0002 5.0kb upstream 5.0kb upstream 15768 true Scaffold7247: 11674-27441 Capsella grandiflora
Cagra.7247s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold7247: 11674-16673 Capsella grandiflora
Cagra.7247s0002 5.0kb downstream 5.0kb downstream 13918 true Scaffold7247: 16674-30591 Capsella grandiflora
Cagra.7247s0002 5.0kb downstream 5.0kb downstream 3150 false Scaffold7247: 27442-30591 Capsella grandiflora
Cagra.7247s0002 10.0kb upstream 10.0kb upstream 20768 true Scaffold7247: 6674-27441 Capsella grandiflora
Cagra.7247s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold7247: 6674-16673 Capsella grandiflora
Cagra.7247s0002 10.0kb downstream 10.0kb downstream 13918 true Scaffold7247: 16674-30591 Capsella grandiflora
Cagra.7247s0002 10.0kb downstream 10.0kb downstream 3150 false Scaffold7247: 27442-30591 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041353 5273 Angiosperm View MSA
122334250 5261 Brassicaceae Singleton cluster - no MSA
123837722 5264 Brassicales-Malvales View MSA
124341961 5266 SBM View MSA
124249572 5268 Malvidae View MSA
124064007 5270 Rosid View MSA
123738277 5271 Pentapetalae View MSA
122788155 5272 Eudicot View MSA
121349093 5274 Embryophyte View MSA
123428824 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain