Gene : Cagra.7254s0004 C. grandiflora v1.1
Defline:  (1 of 5) PTHR23257:SF485 - PAS DOMAIN-CONTAINING PROTEIN TYROSINE KINASE Genomic Order:  4
Name:  ? Cagra.7254s0004 Secondary Identifier:  ? PAC:28904700
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.7254s0004 0.5kb upstream 0.5kb upstream 5931 true Scaffold7254: 12876-18806 Capsella grandiflora
Cagra.7254s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold7254: 12876-13375 Capsella grandiflora
Cagra.7254s0004 0.5kb downstream 0.5kb downstream 5931 true Scaffold7254: 13376-19306 Capsella grandiflora
Cagra.7254s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold7254: 18807-19306 Capsella grandiflora
Cagra.7254s0004 1.0kb upstream 1.0kb upstream 6431 true Scaffold7254: 12376-18806 Capsella grandiflora
Cagra.7254s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold7254: 12376-13375 Capsella grandiflora
Cagra.7254s0004 1.0kb downstream 1.0kb downstream 6431 true Scaffold7254: 13376-19806 Capsella grandiflora
Cagra.7254s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold7254: 18807-19806 Capsella grandiflora
Cagra.7254s0004 2.0kb upstream 2.0kb upstream 7431 true Scaffold7254: 11376-18806 Capsella grandiflora
Cagra.7254s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold7254: 11376-13375 Capsella grandiflora
Cagra.7254s0004 2.0kb downstream 2.0kb downstream 7431 true Scaffold7254: 13376-20806 Capsella grandiflora
Cagra.7254s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold7254: 18807-20806 Capsella grandiflora
Cagra.7254s0004 5.0kb upstream 5.0kb upstream 10431 true Scaffold7254: 8376-18806 Capsella grandiflora
Cagra.7254s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold7254: 8376-13375 Capsella grandiflora
Cagra.7254s0004 5.0kb downstream 5.0kb downstream 10431 true Scaffold7254: 13376-23806 Capsella grandiflora
Cagra.7254s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold7254: 18807-23806 Capsella grandiflora
Cagra.7254s0004 10.0kb upstream 10.0kb upstream 15431 true Scaffold7254: 3376-18806 Capsella grandiflora
Cagra.7254s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold7254: 3376-13375 Capsella grandiflora
Cagra.7254s0004 10.0kb downstream 10.0kb downstream 15431 true Scaffold7254: 13376-28806 Capsella grandiflora
Cagra.7254s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold7254: 18807-28806 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122338532 5261 Brassicaceae View MSA
123779098 5264 Brassicales-Malvales View MSA
124277431 5266 SBM View MSA
124132634 5268 Malvidae View MSA
123860912 5270 Rosid View MSA
123745190 5271 Pentapetalae View MSA
122793223 5272 Eudicot View MSA
122045433 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121310448 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain