Gene : Cagra.7254s0007 C. grandiflora v1.1

Defline:  (1 of 1) PTHR13228 - CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 5 Genomic Order:  7
Name:  ? Cagra.7254s0007 Secondary Identifier:  ? PAC:28904691

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.7254s0007 0.5kb upstream 0.5kb upstream 4115 true Scaffold7254: 29927-34041 Capsella grandiflora
Cagra.7254s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold7254: 33542-34041 Capsella grandiflora
Cagra.7254s0007 0.5kb downstream 0.5kb downstream 4115 true Scaffold7254: 29427-33541 Capsella grandiflora
Cagra.7254s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold7254: 29427-29926 Capsella grandiflora
Cagra.7254s0007 1.0kb upstream 1.0kb upstream 4615 true Scaffold7254: 29927-34541 Capsella grandiflora
Cagra.7254s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold7254: 33542-34541 Capsella grandiflora
Cagra.7254s0007 1.0kb downstream 1.0kb downstream 4615 true Scaffold7254: 28927-33541 Capsella grandiflora
Cagra.7254s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold7254: 28927-29926 Capsella grandiflora
Cagra.7254s0007 2.0kb upstream 2.0kb upstream 5615 true Scaffold7254: 29927-35541 Capsella grandiflora
Cagra.7254s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold7254: 33542-35541 Capsella grandiflora
Cagra.7254s0007 2.0kb downstream 2.0kb downstream 5615 true Scaffold7254: 27927-33541 Capsella grandiflora
Cagra.7254s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold7254: 27927-29926 Capsella grandiflora
Cagra.7254s0007 5.0kb upstream 5.0kb upstream 8615 true Scaffold7254: 29927-38541 Capsella grandiflora
Cagra.7254s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold7254: 33542-38541 Capsella grandiflora
Cagra.7254s0007 5.0kb downstream 5.0kb downstream 8615 true Scaffold7254: 24927-33541 Capsella grandiflora
Cagra.7254s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold7254: 24927-29926 Capsella grandiflora
Cagra.7254s0007 10.0kb upstream 10.0kb upstream 13615 true Scaffold7254: 29927-43541 Capsella grandiflora
Cagra.7254s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold7254: 33542-43541 Capsella grandiflora
Cagra.7254s0007 10.0kb downstream 10.0kb downstream 13615 true Scaffold7254: 19927-33541 Capsella grandiflora
Cagra.7254s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold7254: 19927-29926 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361454 5261 Brassicaceae View MSA
123838759 5264 Brassicales-Malvales View MSA
124344904 5266 SBM View MSA
124239046 5268 Malvidae View MSA
124066917 5270 Rosid View MSA
123747770 5271 Pentapetalae View MSA
122786026 5272 Eudicot View MSA
122043120 5273 Angiosperm View MSA
121345671 5274 Embryophyte View MSA
123424850 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain