Gene : Cagra.7199s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR22835//PTHR22835:SF207 - ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN Genomic Order:  2
Name:  ? Cagra.7199s0002 Secondary Identifier:  ? PAC:28906291
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora LIPAS-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.7199s0002 0.5kb upstream 0.5kb upstream 2721 true Scaffold7199: 5499-8219 Capsella grandiflora
Cagra.7199s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold7199: 7720-8219 Capsella grandiflora
Cagra.7199s0002 0.5kb downstream 0.5kb downstream 2721 true Scaffold7199: 4999-7719 Capsella grandiflora
Cagra.7199s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold7199: 4999-5498 Capsella grandiflora
Cagra.7199s0002 1.0kb upstream 1.0kb upstream 3221 true Scaffold7199: 5499-8719 Capsella grandiflora
Cagra.7199s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold7199: 7720-8719 Capsella grandiflora
Cagra.7199s0002 1.0kb downstream 1.0kb downstream 3221 true Scaffold7199: 4499-7719 Capsella grandiflora
Cagra.7199s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold7199: 4499-5498 Capsella grandiflora
Cagra.7199s0002 2.0kb upstream 2.0kb upstream 3939 true Scaffold7199: 5499-9437 Capsella grandiflora
Cagra.7199s0002 2.0kb upstream 2.0kb upstream 1718 false Scaffold7199: 7720-9437 Capsella grandiflora
Cagra.7199s0002 2.0kb downstream 2.0kb downstream 4221 true Scaffold7199: 3499-7719 Capsella grandiflora
Cagra.7199s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold7199: 3499-5498 Capsella grandiflora
Cagra.7199s0002 5.0kb upstream 5.0kb upstream 3939 true Scaffold7199: 5499-9437 Capsella grandiflora
Cagra.7199s0002 5.0kb upstream 5.0kb upstream 1718 false Scaffold7199: 7720-9437 Capsella grandiflora
Cagra.7199s0002 5.0kb downstream 5.0kb downstream 7221 true Scaffold7199: 499-7719 Capsella grandiflora
Cagra.7199s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold7199: 499-5498 Capsella grandiflora
Cagra.7199s0002 10.0kb upstream 10.0kb upstream 3939 true Scaffold7199: 5499-9437 Capsella grandiflora
Cagra.7199s0002 10.0kb upstream 10.0kb upstream 1718 false Scaffold7199: 7720-9437 Capsella grandiflora
Cagra.7199s0002 10.0kb downstream 10.0kb downstream 7719 true Scaffold7199: 1-7719 Capsella grandiflora
Cagra.7199s0002 10.0kb downstream 10.0kb downstream 5498 false Scaffold7199: 1-5498 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374702 5261 Brassicaceae View MSA
123830494 5264 Brassicales-Malvales View MSA
124342316 5266 SBM View MSA
124238632 5268 Malvidae View MSA
124067838 5270 Rosid View MSA
123737678 5271 Pentapetalae View MSA
122786109 5272 Eudicot View MSA
122042489 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain