Gene : Cagra.7053s0003 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12526:SF315 - GDP-MAN:MAN(3)GLCNAC(2)-PP-DOL ALPHA-1,2-MANNOSYLTRANSFERASE Genomic Order:  3
Name:  ? Cagra.7053s0003 Secondary Identifier:  ? PAC:28914455
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.7053s0003 0.5kb upstream 0.5kb upstream 2767 true Scaffold7053: 6921-9687 Capsella grandiflora
Cagra.7053s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold7053: 6921-7420 Capsella grandiflora
Cagra.7053s0003 0.5kb downstream 0.5kb downstream 2767 true Scaffold7053: 7421-10187 Capsella grandiflora
Cagra.7053s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold7053: 9688-10187 Capsella grandiflora
Cagra.7053s0003 1.0kb upstream 1.0kb upstream 3267 true Scaffold7053: 6421-9687 Capsella grandiflora
Cagra.7053s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold7053: 6421-7420 Capsella grandiflora
Cagra.7053s0003 1.0kb downstream 1.0kb downstream 3267 true Scaffold7053: 7421-10687 Capsella grandiflora
Cagra.7053s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold7053: 9688-10687 Capsella grandiflora
Cagra.7053s0003 2.0kb upstream 2.0kb upstream 4267 true Scaffold7053: 5421-9687 Capsella grandiflora
Cagra.7053s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold7053: 5421-7420 Capsella grandiflora
Cagra.7053s0003 2.0kb downstream 2.0kb downstream 4267 true Scaffold7053: 7421-11687 Capsella grandiflora
Cagra.7053s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold7053: 9688-11687 Capsella grandiflora
Cagra.7053s0003 5.0kb upstream 5.0kb upstream 7267 true Scaffold7053: 2421-9687 Capsella grandiflora
Cagra.7053s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold7053: 2421-7420 Capsella grandiflora
Cagra.7053s0003 5.0kb downstream 5.0kb downstream 7267 true Scaffold7053: 7421-14687 Capsella grandiflora
Cagra.7053s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold7053: 9688-14687 Capsella grandiflora
Cagra.7053s0003 10.0kb upstream 10.0kb upstream 9687 true Scaffold7053: 1-9687 Capsella grandiflora
Cagra.7053s0003 10.0kb upstream 10.0kb upstream 7420 false Scaffold7053: 1-7420 Capsella grandiflora
Cagra.7053s0003 10.0kb downstream 10.0kb downstream 12267 true Scaffold7053: 7421-19687 Capsella grandiflora
Cagra.7053s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold7053: 9688-19687 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377953 5261 Brassicaceae View MSA
123836966 5264 Brassicales-Malvales View MSA
124346935 5266 SBM View MSA
124245452 5268 Malvidae View MSA
124069266 5270 Rosid View MSA
123741917 5271 Pentapetalae View MSA
122794409 5272 Eudicot View MSA
122048989 5273 Angiosperm View MSA
121348193 5274 Embryophyte View MSA
123425539 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain