Gene : Cagra.6942s0021 C. grandiflora v1.1
Defline:  (1 of 2) PTHR13468:SF1 - PROTEIN DEK Genomic Order:  21
Name:  ? Cagra.6942s0021 Secondary Identifier:  ? PAC:28901244
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6942s0021 0.5kb upstream 0.5kb upstream 4596 true Scaffold6942: 65387-69982 Capsella grandiflora
Cagra.6942s0021 0.5kb upstream 0.5kb upstream 500 false Scaffold6942: 65387-65886 Capsella grandiflora
Cagra.6942s0021 0.5kb downstream 0.5kb downstream 4596 true Scaffold6942: 65887-70482 Capsella grandiflora
Cagra.6942s0021 0.5kb downstream 0.5kb downstream 500 false Scaffold6942: 69983-70482 Capsella grandiflora
Cagra.6942s0021 1.0kb upstream 1.0kb upstream 5096 true Scaffold6942: 64887-69982 Capsella grandiflora
Cagra.6942s0021 1.0kb upstream 1.0kb upstream 1000 false Scaffold6942: 64887-65886 Capsella grandiflora
Cagra.6942s0021 1.0kb downstream 1.0kb downstream 5096 true Scaffold6942: 65887-70982 Capsella grandiflora
Cagra.6942s0021 1.0kb downstream 1.0kb downstream 1000 false Scaffold6942: 69983-70982 Capsella grandiflora
Cagra.6942s0021 2.0kb upstream 2.0kb upstream 6096 true Scaffold6942: 63887-69982 Capsella grandiflora
Cagra.6942s0021 2.0kb upstream 2.0kb upstream 2000 false Scaffold6942: 63887-65886 Capsella grandiflora
Cagra.6942s0021 2.0kb downstream 2.0kb downstream 6096 true Scaffold6942: 65887-71982 Capsella grandiflora
Cagra.6942s0021 2.0kb downstream 2.0kb downstream 2000 false Scaffold6942: 69983-71982 Capsella grandiflora
Cagra.6942s0021 5.0kb upstream 5.0kb upstream 9096 true Scaffold6942: 60887-69982 Capsella grandiflora
Cagra.6942s0021 5.0kb upstream 5.0kb upstream 5000 false Scaffold6942: 60887-65886 Capsella grandiflora
Cagra.6942s0021 5.0kb downstream 5.0kb downstream 9096 true Scaffold6942: 65887-74982 Capsella grandiflora
Cagra.6942s0021 5.0kb downstream 5.0kb downstream 5000 false Scaffold6942: 69983-74982 Capsella grandiflora
Cagra.6942s0021 10.0kb upstream 10.0kb upstream 14096 true Scaffold6942: 55887-69982 Capsella grandiflora
Cagra.6942s0021 10.0kb upstream 10.0kb upstream 10000 false Scaffold6942: 55887-65886 Capsella grandiflora
Cagra.6942s0021 10.0kb downstream 10.0kb downstream 14096 true Scaffold6942: 65887-79982 Capsella grandiflora
Cagra.6942s0021 10.0kb downstream 10.0kb downstream 10000 false Scaffold6942: 69983-79982 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366930 5261 Brassicaceae View MSA
123839695 5264 Brassicales-Malvales View MSA
124350029 5266 SBM View MSA
124251106 5268 Malvidae View MSA
124072894 5270 Rosid View MSA
123748946 5271 Pentapetalae View MSA
122791456 5272 Eudicot View MSA
122042773 5273 Angiosperm View MSA
121346519 5274 Embryophyte View MSA
123426401 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain