Gene : Cagra.6943s0002 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10774//PTHR10774:SF82 - EXTENDED SYNAPTOTAGMIN-RELATED Genomic Order:  2
Name:  ? Cagra.6943s0002 Secondary Identifier:  ? PAC:28894525
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6943s0002 0.5kb upstream 0.5kb upstream 6368 true Scaffold6943: 2599-8966 Capsella grandiflora
Cagra.6943s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold6943: 2599-3098 Capsella grandiflora
Cagra.6943s0002 0.5kb downstream 0.5kb downstream 6368 true Scaffold6943: 3099-9466 Capsella grandiflora
Cagra.6943s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold6943: 8967-9466 Capsella grandiflora
Cagra.6943s0002 1.0kb upstream 1.0kb upstream 6868 true Scaffold6943: 2099-8966 Capsella grandiflora
Cagra.6943s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold6943: 2099-3098 Capsella grandiflora
Cagra.6943s0002 1.0kb downstream 1.0kb downstream 6868 true Scaffold6943: 3099-9966 Capsella grandiflora
Cagra.6943s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold6943: 8967-9966 Capsella grandiflora
Cagra.6943s0002 2.0kb upstream 2.0kb upstream 7868 true Scaffold6943: 1099-8966 Capsella grandiflora
Cagra.6943s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold6943: 1099-3098 Capsella grandiflora
Cagra.6943s0002 2.0kb downstream 2.0kb downstream 7868 true Scaffold6943: 3099-10966 Capsella grandiflora
Cagra.6943s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold6943: 8967-10966 Capsella grandiflora
Cagra.6943s0002 5.0kb upstream 5.0kb upstream 8966 true Scaffold6943: 1-8966 Capsella grandiflora
Cagra.6943s0002 5.0kb upstream 5.0kb upstream 3098 false Scaffold6943: 1-3098 Capsella grandiflora
Cagra.6943s0002 5.0kb downstream 5.0kb downstream 10868 true Scaffold6943: 3099-13966 Capsella grandiflora
Cagra.6943s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold6943: 8967-13966 Capsella grandiflora
Cagra.6943s0002 10.0kb upstream 10.0kb upstream 8966 true Scaffold6943: 1-8966 Capsella grandiflora
Cagra.6943s0002 10.0kb upstream 10.0kb upstream 3098 false Scaffold6943: 1-3098 Capsella grandiflora
Cagra.6943s0002 10.0kb downstream 10.0kb downstream 15868 true Scaffold6943: 3099-18966 Capsella grandiflora
Cagra.6943s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold6943: 8967-18966 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371302 5261 Brassicaceae View MSA
123840633 5264 Brassicales-Malvales View MSA
124344005 5266 SBM View MSA
124244060 5268 Malvidae View MSA
124061205 5270 Rosid View MSA
123738093 5271 Pentapetalae View MSA
122787602 5272 Eudicot View MSA
122047989 5273 Angiosperm View MSA
121348043 5274 Embryophyte View MSA
123426987 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain