Gene : Cagra.6845s0001 C. grandiflora v1.1
Defline:  (1 of 5) PTHR31867:SF33 - EXPANSIN-A21-RELATED Genomic Order:  1
Name:  ? Cagra.6845s0001 Secondary Identifier:  ? PAC:28894107
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6845s0001 0.5kb upstream 0.5kb upstream 1035 true Scaffold6845: 1-1035 Capsella grandiflora
Cagra.6845s0001 0.5kb upstream 0.5kb upstream 50 false Scaffold6845: 1-50 Capsella grandiflora
Cagra.6845s0001 0.5kb downstream 0.5kb downstream 1485 true Scaffold6845: 51-1535 Capsella grandiflora
Cagra.6845s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold6845: 1036-1535 Capsella grandiflora
Cagra.6845s0001 1.0kb upstream 1.0kb upstream 1035 true Scaffold6845: 1-1035 Capsella grandiflora
Cagra.6845s0001 1.0kb upstream 1.0kb upstream 50 false Scaffold6845: 1-50 Capsella grandiflora
Cagra.6845s0001 1.0kb downstream 1.0kb downstream 1985 true Scaffold6845: 51-2035 Capsella grandiflora
Cagra.6845s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold6845: 1036-2035 Capsella grandiflora
Cagra.6845s0001 2.0kb upstream 2.0kb upstream 1035 true Scaffold6845: 1-1035 Capsella grandiflora
Cagra.6845s0001 2.0kb upstream 2.0kb upstream 50 false Scaffold6845: 1-50 Capsella grandiflora
Cagra.6845s0001 2.0kb downstream 2.0kb downstream 2985 true Scaffold6845: 51-3035 Capsella grandiflora
Cagra.6845s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold6845: 1036-3035 Capsella grandiflora
Cagra.6845s0001 5.0kb upstream 5.0kb upstream 1035 true Scaffold6845: 1-1035 Capsella grandiflora
Cagra.6845s0001 5.0kb upstream 5.0kb upstream 50 false Scaffold6845: 1-50 Capsella grandiflora
Cagra.6845s0001 5.0kb downstream 5.0kb downstream 5985 true Scaffold6845: 51-6035 Capsella grandiflora
Cagra.6845s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold6845: 1036-6035 Capsella grandiflora
Cagra.6845s0001 10.0kb upstream 10.0kb upstream 1035 true Scaffold6845: 1-1035 Capsella grandiflora
Cagra.6845s0001 10.0kb upstream 10.0kb upstream 50 false Scaffold6845: 1-50 Capsella grandiflora
Cagra.6845s0001 10.0kb downstream 10.0kb downstream 10985 true Scaffold6845: 51-11035 Capsella grandiflora
Cagra.6845s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold6845: 1036-11035 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380622 5261 Brassicaceae View MSA
123838557 5264 Brassicales-Malvales View MSA
124341019 5266 SBM View MSA
124248969 5268 Malvidae View MSA
124064025 5270 Rosid View MSA
123753539 5271 Pentapetalae View MSA
122795213 5272 Eudicot View MSA
122043079 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351680 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain