Gene : Cagra.6845s0013 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10102//PTHR10102:SF3 - DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIAL Genomic Order:  13
Name:  ? Cagra.6845s0013 Secondary Identifier:  ? PAC:28894094
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6845s0013 0.5kb upstream 0.5kb upstream 6856 true Scaffold6845: 47990-54845 Capsella grandiflora
Cagra.6845s0013 0.5kb upstream 0.5kb upstream 500 false Scaffold6845: 54346-54845 Capsella grandiflora
Cagra.6845s0013 0.5kb downstream 0.5kb downstream 6856 true Scaffold6845: 47490-54345 Capsella grandiflora
Cagra.6845s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold6845: 47490-47989 Capsella grandiflora
Cagra.6845s0013 1.0kb upstream 1.0kb upstream 7356 true Scaffold6845: 47990-55345 Capsella grandiflora
Cagra.6845s0013 1.0kb upstream 1.0kb upstream 1000 false Scaffold6845: 54346-55345 Capsella grandiflora
Cagra.6845s0013 1.0kb downstream 1.0kb downstream 7356 true Scaffold6845: 46990-54345 Capsella grandiflora
Cagra.6845s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold6845: 46990-47989 Capsella grandiflora
Cagra.6845s0013 2.0kb upstream 2.0kb upstream 8356 true Scaffold6845: 47990-56345 Capsella grandiflora
Cagra.6845s0013 2.0kb upstream 2.0kb upstream 2000 false Scaffold6845: 54346-56345 Capsella grandiflora
Cagra.6845s0013 2.0kb downstream 2.0kb downstream 8356 true Scaffold6845: 45990-54345 Capsella grandiflora
Cagra.6845s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold6845: 45990-47989 Capsella grandiflora
Cagra.6845s0013 5.0kb upstream 5.0kb upstream 11356 true Scaffold6845: 47990-59345 Capsella grandiflora
Cagra.6845s0013 5.0kb upstream 5.0kb upstream 5000 false Scaffold6845: 54346-59345 Capsella grandiflora
Cagra.6845s0013 5.0kb downstream 5.0kb downstream 11356 true Scaffold6845: 42990-54345 Capsella grandiflora
Cagra.6845s0013 5.0kb downstream 5.0kb downstream 5000 false Scaffold6845: 42990-47989 Capsella grandiflora
Cagra.6845s0013 10.0kb upstream 10.0kb upstream 16356 true Scaffold6845: 47990-64345 Capsella grandiflora
Cagra.6845s0013 10.0kb upstream 10.0kb upstream 10000 false Scaffold6845: 54346-64345 Capsella grandiflora
Cagra.6845s0013 10.0kb downstream 10.0kb downstream 16356 true Scaffold6845: 37990-54345 Capsella grandiflora
Cagra.6845s0013 10.0kb downstream 10.0kb downstream 10000 false Scaffold6845: 37990-47989 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369880 5261 Brassicaceae View MSA
123832032 5264 Brassicales-Malvales View MSA
124342674 5266 SBM View MSA
124251682 5268 Malvidae View MSA
124071621 5270 Rosid View MSA
123742172 5271 Pentapetalae View MSA
122791683 5272 Eudicot View MSA
122050149 5273 Angiosperm View MSA
121347767 5274 Embryophyte View MSA
123426573 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain