Gene : Cagra.6624s0039 C. grandiflora v1.1
Defline:  (1 of 2) PF01453//PF07714//PF08276 - D-mannose binding lectin (B_lectin) // Protein tyrosine kinase (Pkinase_Tyr) // PAN-like domain (PAN_2) Genomic Order:  39
Name:  ? Cagra.6624s0039 Secondary Identifier:  ? PAC:28901154
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6624s0039 0.5kb upstream 0.5kb upstream 5243 true Scaffold6624: 133132-138374 Capsella grandiflora
Cagra.6624s0039 0.5kb upstream 0.5kb upstream 500 false Scaffold6624: 137875-138374 Capsella grandiflora
Cagra.6624s0039 0.5kb downstream 0.5kb downstream 5243 true Scaffold6624: 132632-137874 Capsella grandiflora
Cagra.6624s0039 0.5kb downstream 0.5kb downstream 500 false Scaffold6624: 132632-133131 Capsella grandiflora
Cagra.6624s0039 1.0kb upstream 1.0kb upstream 5743 true Scaffold6624: 133132-138874 Capsella grandiflora
Cagra.6624s0039 1.0kb upstream 1.0kb upstream 1000 false Scaffold6624: 137875-138874 Capsella grandiflora
Cagra.6624s0039 1.0kb downstream 1.0kb downstream 5743 true Scaffold6624: 132132-137874 Capsella grandiflora
Cagra.6624s0039 1.0kb downstream 1.0kb downstream 1000 false Scaffold6624: 132132-133131 Capsella grandiflora
Cagra.6624s0039 2.0kb upstream 2.0kb upstream 6743 true Scaffold6624: 133132-139874 Capsella grandiflora
Cagra.6624s0039 2.0kb upstream 2.0kb upstream 2000 false Scaffold6624: 137875-139874 Capsella grandiflora
Cagra.6624s0039 2.0kb downstream 2.0kb downstream 6743 true Scaffold6624: 131132-137874 Capsella grandiflora
Cagra.6624s0039 2.0kb downstream 2.0kb downstream 2000 false Scaffold6624: 131132-133131 Capsella grandiflora
Cagra.6624s0039 5.0kb upstream 5.0kb upstream 9743 true Scaffold6624: 133132-142874 Capsella grandiflora
Cagra.6624s0039 5.0kb upstream 5.0kb upstream 5000 false Scaffold6624: 137875-142874 Capsella grandiflora
Cagra.6624s0039 5.0kb downstream 5.0kb downstream 9743 true Scaffold6624: 128132-137874 Capsella grandiflora
Cagra.6624s0039 5.0kb downstream 5.0kb downstream 5000 false Scaffold6624: 128132-133131 Capsella grandiflora
Cagra.6624s0039 10.0kb upstream 10.0kb upstream 14743 true Scaffold6624: 133132-147874 Capsella grandiflora
Cagra.6624s0039 10.0kb upstream 10.0kb upstream 10000 false Scaffold6624: 137875-147874 Capsella grandiflora
Cagra.6624s0039 10.0kb downstream 10.0kb downstream 14743 true Scaffold6624: 123132-137874 Capsella grandiflora
Cagra.6624s0039 10.0kb downstream 10.0kb downstream 10000 false Scaffold6624: 123132-133131 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378050 5261 Brassicaceae View MSA
123841677 5264 Brassicales-Malvales View MSA
124346599 5266 SBM View MSA
124248420 5268 Malvidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain