Gene : Cagra.6664s0002 C. grandiflora v1.1
Defline:  (1 of 4) PTHR19139:SF169 - AQUAPORIN PIP1-4-RELATED Genomic Order:  2
Name:  ? Cagra.6664s0002 Secondary Identifier:  ? PAC:28917274
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6664s0002 0.5kb upstream 0.5kb upstream 1996 true Scaffold6664: 3916-5911 Capsella grandiflora
Cagra.6664s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold6664: 5412-5911 Capsella grandiflora
Cagra.6664s0002 0.5kb downstream 0.5kb downstream 1996 true Scaffold6664: 3416-5411 Capsella grandiflora
Cagra.6664s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold6664: 3416-3915 Capsella grandiflora
Cagra.6664s0002 1.0kb upstream 1.0kb upstream 2496 true Scaffold6664: 3916-6411 Capsella grandiflora
Cagra.6664s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold6664: 5412-6411 Capsella grandiflora
Cagra.6664s0002 1.0kb downstream 1.0kb downstream 2496 true Scaffold6664: 2916-5411 Capsella grandiflora
Cagra.6664s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold6664: 2916-3915 Capsella grandiflora
Cagra.6664s0002 2.0kb upstream 2.0kb upstream 3496 true Scaffold6664: 3916-7411 Capsella grandiflora
Cagra.6664s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold6664: 5412-7411 Capsella grandiflora
Cagra.6664s0002 2.0kb downstream 2.0kb downstream 3496 true Scaffold6664: 1916-5411 Capsella grandiflora
Cagra.6664s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold6664: 1916-3915 Capsella grandiflora
Cagra.6664s0002 5.0kb upstream 5.0kb upstream 6496 true Scaffold6664: 3916-10411 Capsella grandiflora
Cagra.6664s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold6664: 5412-10411 Capsella grandiflora
Cagra.6664s0002 5.0kb downstream 5.0kb downstream 5411 true Scaffold6664: 1-5411 Capsella grandiflora
Cagra.6664s0002 5.0kb downstream 5.0kb downstream 3915 false Scaffold6664: 1-3915 Capsella grandiflora
Cagra.6664s0002 10.0kb upstream 10.0kb upstream 11496 true Scaffold6664: 3916-15411 Capsella grandiflora
Cagra.6664s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold6664: 5412-15411 Capsella grandiflora
Cagra.6664s0002 10.0kb downstream 10.0kb downstream 5411 true Scaffold6664: 1-5411 Capsella grandiflora
Cagra.6664s0002 10.0kb downstream 10.0kb downstream 3915 false Scaffold6664: 1-3915 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360189 5261 Brassicaceae View MSA
123797909 5264 Brassicales-Malvales View MSA
124295608 5266 SBM View MSA
124250285 5268 Malvidae View MSA
124069704 5270 Rosid View MSA
123745949 5271 Pentapetalae View MSA
122797491 5272 Eudicot View MSA
122048172 5273 Angiosperm View MSA
121347891 5274 Embryophyte View MSA
123428679 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain