Gene : Cagra.6677s0009 C. grandiflora v1.1
Defline:  (1 of 1) PTHR22715 - TRANSFORMING GROWTH FACTOR BETA REGULATED GENE 1 Genomic Order:  9
Name:  ? Cagra.6677s0009 Secondary Identifier:  ? PAC:28896516
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6677s0009 0.5kb upstream 0.5kb upstream 6236 true Scaffold6677: 28963-35198 Capsella grandiflora
Cagra.6677s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold6677: 28963-29462 Capsella grandiflora
Cagra.6677s0009 0.5kb downstream 0.5kb downstream 6236 true Scaffold6677: 29463-35698 Capsella grandiflora
Cagra.6677s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold6677: 35199-35698 Capsella grandiflora
Cagra.6677s0009 1.0kb upstream 1.0kb upstream 6736 true Scaffold6677: 28463-35198 Capsella grandiflora
Cagra.6677s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold6677: 28463-29462 Capsella grandiflora
Cagra.6677s0009 1.0kb downstream 1.0kb downstream 6736 true Scaffold6677: 29463-36198 Capsella grandiflora
Cagra.6677s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold6677: 35199-36198 Capsella grandiflora
Cagra.6677s0009 2.0kb upstream 2.0kb upstream 7736 true Scaffold6677: 27463-35198 Capsella grandiflora
Cagra.6677s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold6677: 27463-29462 Capsella grandiflora
Cagra.6677s0009 2.0kb downstream 2.0kb downstream 7736 true Scaffold6677: 29463-37198 Capsella grandiflora
Cagra.6677s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold6677: 35199-37198 Capsella grandiflora
Cagra.6677s0009 5.0kb upstream 5.0kb upstream 10736 true Scaffold6677: 24463-35198 Capsella grandiflora
Cagra.6677s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold6677: 24463-29462 Capsella grandiflora
Cagra.6677s0009 5.0kb downstream 5.0kb downstream 10736 true Scaffold6677: 29463-40198 Capsella grandiflora
Cagra.6677s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold6677: 35199-40198 Capsella grandiflora
Cagra.6677s0009 10.0kb upstream 10.0kb upstream 15736 true Scaffold6677: 19463-35198 Capsella grandiflora
Cagra.6677s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold6677: 19463-29462 Capsella grandiflora
Cagra.6677s0009 10.0kb downstream 10.0kb downstream 15736 true Scaffold6677: 29463-45198 Capsella grandiflora
Cagra.6677s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold6677: 35199-45198 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122791478 5272 Eudicot View MSA
122378224 5261 Brassicaceae View MSA
123827926 5264 Brassicales-Malvales View MSA
124343816 5266 SBM View MSA
124239422 5268 Malvidae View MSA
124067691 5270 Rosid View MSA
123742066 5271 Pentapetalae View MSA
122043889 5273 Angiosperm View MSA
121348406 5274 Embryophyte View MSA
123380850 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain