Gene : Cagra.6539s0002 C. grandiflora v1.1
Defline:  (1 of 3) PTHR31205:SF2 - ACTIN CROSS-LINKING PROTEIN Genomic Order:  2
Name:  ? Cagra.6539s0002 Secondary Identifier:  ? PAC:28901506
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6539s0002 0.5kb upstream 0.5kb upstream 1556 true Scaffold6539: 2223-3778 Capsella grandiflora
Cagra.6539s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold6539: 3279-3778 Capsella grandiflora
Cagra.6539s0002 0.5kb downstream 0.5kb downstream 1556 true Scaffold6539: 1723-3278 Capsella grandiflora
Cagra.6539s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold6539: 1723-2222 Capsella grandiflora
Cagra.6539s0002 1.0kb upstream 1.0kb upstream 2056 true Scaffold6539: 2223-4278 Capsella grandiflora
Cagra.6539s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold6539: 3279-4278 Capsella grandiflora
Cagra.6539s0002 1.0kb downstream 1.0kb downstream 2056 true Scaffold6539: 1223-3278 Capsella grandiflora
Cagra.6539s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold6539: 1223-2222 Capsella grandiflora
Cagra.6539s0002 2.0kb upstream 2.0kb upstream 3056 true Scaffold6539: 2223-5278 Capsella grandiflora
Cagra.6539s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold6539: 3279-5278 Capsella grandiflora
Cagra.6539s0002 2.0kb downstream 2.0kb downstream 3056 true Scaffold6539: 223-3278 Capsella grandiflora
Cagra.6539s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold6539: 223-2222 Capsella grandiflora
Cagra.6539s0002 5.0kb upstream 5.0kb upstream 4667 true Scaffold6539: 2223-6889 Capsella grandiflora
Cagra.6539s0002 5.0kb upstream 5.0kb upstream 3611 false Scaffold6539: 3279-6889 Capsella grandiflora
Cagra.6539s0002 5.0kb downstream 5.0kb downstream 3278 true Scaffold6539: 1-3278 Capsella grandiflora
Cagra.6539s0002 5.0kb downstream 5.0kb downstream 2222 false Scaffold6539: 1-2222 Capsella grandiflora
Cagra.6539s0002 10.0kb upstream 10.0kb upstream 4667 true Scaffold6539: 2223-6889 Capsella grandiflora
Cagra.6539s0002 10.0kb upstream 10.0kb upstream 3611 false Scaffold6539: 3279-6889 Capsella grandiflora
Cagra.6539s0002 10.0kb downstream 10.0kb downstream 3278 true Scaffold6539: 1-3278 Capsella grandiflora
Cagra.6539s0002 10.0kb downstream 10.0kb downstream 2222 false Scaffold6539: 1-2222 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366165 5261 Brassicaceae View MSA
123838664 5264 Brassicales-Malvales View MSA
124322486 5266 SBM View MSA
124249792 5268 Malvidae View MSA
124067257 5270 Rosid View MSA
123752337 5271 Pentapetalae View MSA
122792795 5272 Eudicot View MSA
122046577 5273 Angiosperm View MSA
121350939 5274 Embryophyte View MSA
123381941 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain