Gene : Cagra.6571s0005 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12459:SF6 - TRANSMEMBRANE PROTEIN Genomic Order:  5
Name:  ? Cagra.6571s0005 Secondary Identifier:  ? PAC:28898507
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6571s0005 0.5kb upstream 0.5kb upstream 3595 true Scaffold6571: 20573-24167 Capsella grandiflora
Cagra.6571s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold6571: 20573-21072 Capsella grandiflora
Cagra.6571s0005 0.5kb downstream 0.5kb downstream 3595 true Scaffold6571: 21073-24667 Capsella grandiflora
Cagra.6571s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold6571: 24168-24667 Capsella grandiflora
Cagra.6571s0005 1.0kb upstream 1.0kb upstream 4095 true Scaffold6571: 20073-24167 Capsella grandiflora
Cagra.6571s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold6571: 20073-21072 Capsella grandiflora
Cagra.6571s0005 1.0kb downstream 1.0kb downstream 4095 true Scaffold6571: 21073-25167 Capsella grandiflora
Cagra.6571s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold6571: 24168-25167 Capsella grandiflora
Cagra.6571s0005 2.0kb upstream 2.0kb upstream 5095 true Scaffold6571: 19073-24167 Capsella grandiflora
Cagra.6571s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold6571: 19073-21072 Capsella grandiflora
Cagra.6571s0005 2.0kb downstream 2.0kb downstream 5095 true Scaffold6571: 21073-26167 Capsella grandiflora
Cagra.6571s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold6571: 24168-26167 Capsella grandiflora
Cagra.6571s0005 5.0kb upstream 5.0kb upstream 8095 true Scaffold6571: 16073-24167 Capsella grandiflora
Cagra.6571s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold6571: 16073-21072 Capsella grandiflora
Cagra.6571s0005 5.0kb downstream 5.0kb downstream 8095 true Scaffold6571: 21073-29167 Capsella grandiflora
Cagra.6571s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold6571: 24168-29167 Capsella grandiflora
Cagra.6571s0005 10.0kb upstream 10.0kb upstream 13095 true Scaffold6571: 11073-24167 Capsella grandiflora
Cagra.6571s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold6571: 11073-21072 Capsella grandiflora
Cagra.6571s0005 10.0kb downstream 10.0kb downstream 13095 true Scaffold6571: 21073-34167 Capsella grandiflora
Cagra.6571s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold6571: 24168-34167 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375848 5261 Brassicaceae View MSA
123833319 5264 Brassicales-Malvales View MSA
124341910 5266 SBM View MSA
124237797 5268 Malvidae View MSA
124065046 5270 Rosid View MSA
123736440 5271 Pentapetalae View MSA
122793822 5272 Eudicot View MSA
122042265 5273 Angiosperm View MSA
121346906 5274 Embryophyte View MSA
123424651 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain