Gene : Cagra.6594s0010 C. grandiflora v1.1
Defline:  (1 of 1) KOG0843 - Transcription factor EMX1 and related HOX domain proteins Genomic Order:  10
Name:  ? Cagra.6594s0010 Secondary Identifier:  ? PAC:28900877
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6594s0010 0.5kb upstream 0.5kb upstream 5793 true Scaffold6594: 38120-43912 Capsella grandiflora
Cagra.6594s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold6594: 43413-43912 Capsella grandiflora
Cagra.6594s0010 0.5kb downstream 0.5kb downstream 5793 true Scaffold6594: 37620-43412 Capsella grandiflora
Cagra.6594s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold6594: 37620-38119 Capsella grandiflora
Cagra.6594s0010 1.0kb upstream 1.0kb upstream 6293 true Scaffold6594: 38120-44412 Capsella grandiflora
Cagra.6594s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold6594: 43413-44412 Capsella grandiflora
Cagra.6594s0010 1.0kb downstream 1.0kb downstream 6293 true Scaffold6594: 37120-43412 Capsella grandiflora
Cagra.6594s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold6594: 37120-38119 Capsella grandiflora
Cagra.6594s0010 2.0kb upstream 2.0kb upstream 7293 true Scaffold6594: 38120-45412 Capsella grandiflora
Cagra.6594s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold6594: 43413-45412 Capsella grandiflora
Cagra.6594s0010 2.0kb downstream 2.0kb downstream 7293 true Scaffold6594: 36120-43412 Capsella grandiflora
Cagra.6594s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold6594: 36120-38119 Capsella grandiflora
Cagra.6594s0010 5.0kb upstream 5.0kb upstream 10293 true Scaffold6594: 38120-48412 Capsella grandiflora
Cagra.6594s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold6594: 43413-48412 Capsella grandiflora
Cagra.6594s0010 5.0kb downstream 5.0kb downstream 10293 true Scaffold6594: 33120-43412 Capsella grandiflora
Cagra.6594s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold6594: 33120-38119 Capsella grandiflora
Cagra.6594s0010 10.0kb upstream 10.0kb upstream 15293 true Scaffold6594: 38120-53412 Capsella grandiflora
Cagra.6594s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold6594: 43413-53412 Capsella grandiflora
Cagra.6594s0010 10.0kb downstream 10.0kb downstream 15293 true Scaffold6594: 28120-43412 Capsella grandiflora
Cagra.6594s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold6594: 28120-38119 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370627 5261 Brassicaceae View MSA
123839953 5264 Brassicales-Malvales View MSA
124341523 5266 SBM View MSA
124237693 5268 Malvidae View MSA
124063291 5270 Rosid View MSA
123740352 5271 Pentapetalae View MSA
122790073 5272 Eudicot View MSA
122048483 5273 Angiosperm View MSA
121350910 5274 Embryophyte View MSA
123381934 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain