Gene : Cagra.6622s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR30560//PTHR30560:SF4 - TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE Genomic Order:  2
Name:  ? Cagra.6622s0002 Secondary Identifier:  ? PAC:28918179
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6622s0002 0.5kb upstream 0.5kb upstream 3547 true Scaffold6622: 5792-9338 Capsella grandiflora
Cagra.6622s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold6622: 8839-9338 Capsella grandiflora
Cagra.6622s0002 0.5kb downstream 0.5kb downstream 3547 true Scaffold6622: 5292-8838 Capsella grandiflora
Cagra.6622s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold6622: 5292-5791 Capsella grandiflora
Cagra.6622s0002 1.0kb upstream 1.0kb upstream 4047 true Scaffold6622: 5792-9838 Capsella grandiflora
Cagra.6622s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold6622: 8839-9838 Capsella grandiflora
Cagra.6622s0002 1.0kb downstream 1.0kb downstream 4047 true Scaffold6622: 4792-8838 Capsella grandiflora
Cagra.6622s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold6622: 4792-5791 Capsella grandiflora
Cagra.6622s0002 2.0kb upstream 2.0kb upstream 5047 true Scaffold6622: 5792-10838 Capsella grandiflora
Cagra.6622s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold6622: 8839-10838 Capsella grandiflora
Cagra.6622s0002 2.0kb downstream 2.0kb downstream 5047 true Scaffold6622: 3792-8838 Capsella grandiflora
Cagra.6622s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold6622: 3792-5791 Capsella grandiflora
Cagra.6622s0002 5.0kb upstream 5.0kb upstream 8047 true Scaffold6622: 5792-13838 Capsella grandiflora
Cagra.6622s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold6622: 8839-13838 Capsella grandiflora
Cagra.6622s0002 5.0kb downstream 5.0kb downstream 8047 true Scaffold6622: 792-8838 Capsella grandiflora
Cagra.6622s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold6622: 792-5791 Capsella grandiflora
Cagra.6622s0002 10.0kb upstream 10.0kb upstream 13047 true Scaffold6622: 5792-18838 Capsella grandiflora
Cagra.6622s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold6622: 8839-18838 Capsella grandiflora
Cagra.6622s0002 10.0kb downstream 10.0kb downstream 8838 true Scaffold6622: 1-8838 Capsella grandiflora
Cagra.6622s0002 10.0kb downstream 10.0kb downstream 5791 false Scaffold6622: 1-5791 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370185 5261 Brassicaceae View MSA
123833532 5264 Brassicales-Malvales View MSA
124338543 5266 SBM View MSA
124237992 5268 Malvidae View MSA
124073258 5270 Rosid View MSA
123748719 5271 Pentapetalae View MSA
122795151 5272 Eudicot View MSA
122048682 5273 Angiosperm View MSA
121348209 5274 Embryophyte View MSA
123380773 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain