Gene : Cagra.9536s0020 C. grandiflora v1.1
Defline:  (1 of 2) PF11947 - Protein of unknown function (DUF3464) (DUF3464) Genomic Order:  20
Name:  ? Cagra.9536s0020 Secondary Identifier:  ? PAC:28896604
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.9536s0020 0.5kb upstream 0.5kb upstream 1418 true Scaffold9536: 71809-73226 Capsella grandiflora
Cagra.9536s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold9536: 71809-72308 Capsella grandiflora
Cagra.9536s0020 0.5kb downstream 0.5kb downstream 1418 true Scaffold9536: 72309-73726 Capsella grandiflora
Cagra.9536s0020 0.5kb downstream 0.5kb downstream 500 false Scaffold9536: 73227-73726 Capsella grandiflora
Cagra.9536s0020 1.0kb upstream 1.0kb upstream 1918 true Scaffold9536: 71309-73226 Capsella grandiflora
Cagra.9536s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold9536: 71309-72308 Capsella grandiflora
Cagra.9536s0020 1.0kb downstream 1.0kb downstream 1918 true Scaffold9536: 72309-74226 Capsella grandiflora
Cagra.9536s0020 1.0kb downstream 1.0kb downstream 1000 false Scaffold9536: 73227-74226 Capsella grandiflora
Cagra.9536s0020 2.0kb upstream 2.0kb upstream 2918 true Scaffold9536: 70309-73226 Capsella grandiflora
Cagra.9536s0020 2.0kb upstream 2.0kb upstream 2000 false Scaffold9536: 70309-72308 Capsella grandiflora
Cagra.9536s0020 2.0kb downstream 2.0kb downstream 2918 true Scaffold9536: 72309-75226 Capsella grandiflora
Cagra.9536s0020 2.0kb downstream 2.0kb downstream 2000 false Scaffold9536: 73227-75226 Capsella grandiflora
Cagra.9536s0020 5.0kb upstream 5.0kb upstream 5918 true Scaffold9536: 67309-73226 Capsella grandiflora
Cagra.9536s0020 5.0kb upstream 5.0kb upstream 5000 false Scaffold9536: 67309-72308 Capsella grandiflora
Cagra.9536s0020 5.0kb downstream 5.0kb downstream 5918 true Scaffold9536: 72309-78226 Capsella grandiflora
Cagra.9536s0020 5.0kb downstream 5.0kb downstream 5000 false Scaffold9536: 73227-78226 Capsella grandiflora
Cagra.9536s0020 10.0kb upstream 10.0kb upstream 10918 true Scaffold9536: 62309-73226 Capsella grandiflora
Cagra.9536s0020 10.0kb upstream 10.0kb upstream 10000 false Scaffold9536: 62309-72308 Capsella grandiflora
Cagra.9536s0020 10.0kb downstream 10.0kb downstream 10918 true Scaffold9536: 72309-83226 Capsella grandiflora
Cagra.9536s0020 10.0kb downstream 10.0kb downstream 10000 false Scaffold9536: 73227-83226 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373027 5261 Brassicaceae View MSA
123831222 5264 Brassicales-Malvales View MSA
124345665 5266 SBM View MSA
124239273 5268 Malvidae View MSA
124067911 5270 Rosid View MSA
123738639 5271 Pentapetalae View MSA
122792645 5272 Eudicot View MSA
122046649 5273 Angiosperm View MSA
121348094 5274 Embryophyte View MSA
123428537 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain